RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF569Q5MCW4 686 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 CAPRIN2Q6IMN6 1127 aaKnown RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 SASS6Q6UVJ0 657 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 SSC4DQ8WTU2 575 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 TEKT4Q8WW24 435 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 MLPHQ9BV36 600 aaPredicted RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 SPATA16Q9BXB7 569 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 OR2AG1Q9H205 316 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 PCDH18Q9HCL0 1135 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 PDE7BQ9NP56 450 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 LHX9Q9NQ69 397 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 AMACRQ9UHK6 382 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 PCDHGA6Q9Y5G7 932 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 USP9YO00507 2555 aaPredicted RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 LRRC10BA6NIK2 292 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 LRRC53A6NM62 1247 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 C21orf140B9A014 251 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 MATN3O15232 486 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 TCF4P15884 667 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 LEPRP48357 1165 aaKnown RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 PGDP52209 483 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 SEPT7Q16181 437 aaKnown RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
VARS-228ENST00000495010 IRGCQ6NXR0 463 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 CRTC3Q6UUV7 619 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 FAM92BQ6ZTR7 304 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 APLFQ8IW19 511 aaPredicted RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 CT55Q8WUE5 264 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 CXorf40BQ96DE9 158 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 WDR24Q96S15 920 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 LYSMD1Q96S90 227 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 ADGRE3Q9BY15 652 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 TRIM39Q9HCM9 518 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 ACSS2Q9NR19 701 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 POT1Q9NUX5 634 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 ANO10Q9NW15 660 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 SCHIP1Q9P0W5 487 aaPredicted RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
VARS-228ENST00000495010 DNAJC16Q9Y2G8 782 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 SLC30A1Q9Y6M5 507 aa14.04□□□□□ -0.16
VARS-228ENST00000495010 RELNP78509 3460 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 GPR89AB7ZAQ6 455 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 KMOO15229 486 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 DNAJB5O75953 348 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 PRLP01236 227 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 GPR89BP0CG08 455 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ZNF7P17097 686 aaPredicted RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 CCNCP24863 283 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 SLC19A1P41440 591 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 RPS15P62841 145 aaKnown RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 PDE1BQ01064 536 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 GALNT2Q10471 571 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ZNF648Q5T619 568 aaPredicted RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 ALS2CLQ60I27 953 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ZNF571Q7Z3V5 609 aaPredicted RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 PRSS42Q7Z5A4 293 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 LRRTM4Q86VH4 590 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 RBM12BQ8IXT5 1001 aaKnown RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 THAP4Q8WY91 577 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 SLC25A23Q9BV35 468 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ACTL8Q9H568 366 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 RAD18Q9NS91 495 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 ZNF624Q9P2J8 865 aaPredicted RBP14.03□□□□□ -0.16
VARS-228ENST00000495010 IP6K2Q9UHH9 426 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 RARRES3Q9UL19 164 aa14.03□□□□□ -0.16
VARS-228ENST00000495010 GOLGA6L3A6NEY3 463 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ENO4A6NNW6 628 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.17
VARS-228ENST00000495010 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 MFSD11O43934 449 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 PDGFAP04085 211 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 VCLP18206 1134 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 IDSP22304 550 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 RPL10P27635 214 aaKnown RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 CAPZBP47756 277 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ARL4DP49703 201 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 CCL11P51671 97 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 TUBB3Q13509 450 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 QPCTQ16769 361 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 HADHQ16836 314 aaKnown RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 TXNRD3NBQ6F5E7 133 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ADGRG6Q86SQ4 1221 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 SIDT2Q8NBJ9 832 aaKnown RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 ARRDC2Q8TBH0 407 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 KLHL6Q8WZ60 621 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 MAML1Q92585 1016 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 RSC1A1Q92681 617 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ZSCAN5AQ9BUG6 496 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 GPR87Q9BY21 358 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 TRIM55Q9BYV6 548 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 BRD8Q9H0E9 1235 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 ZFYVE1Q9HBF4 777 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms