RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PELI3Q8N2H9 469 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 OXR1Q8N573 874 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
LSM2-214ENST00000493387 OR56A4Q8NGH8 313 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 CYTH2Q99418 400 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 CCDC77Q9BR77 488 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 ZDHHC5Q9C0B5 715 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 GPR27Q9NS67 375 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 IARS2Q9NSE4 1012 aaKnown RBP11.44□□□□□ -0.58
LSM2-214ENST00000493387 ZFATQ9P243 1243 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 FBXO5Q9UKT4 447 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 TMPRSS11EQ9UL52 423 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 PLXNA2O75051 1894 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 VCANP13611 3396 aa11.44□□□□□ -0.58
LSM2-214ENST00000493387 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 MYLKQ15746 1914 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 IGLV3-16A0A075B6K0 115 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 KLHL33A6NCF5 533 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 FAM159BA6NKW6 160 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 GOLGA8KD6RF30 607 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 H3BMM5 538 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 GOLGA8TH3BQL2 631 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 PRMT5O14744 637 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 RIPK2O43353 540 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 DFNA5O60443 496 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 CDK14O94921 469 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 AP2A2O94973 939 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ACSL3O95573 720 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 WNT1P04628 370 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 IVLP07476 585 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 GSTM1P09488 218 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ATP1B2P14415 290 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 CSNK1EP49674 416 aaKnown RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 ADARP55265 1226 aaKnown RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 NXPH1P58417 271 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 GSTM4Q03013 218 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 TMEM115Q12893 351 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 LPAL2Q16609 132 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 TEDDM1Q5T9Z0 273 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 TRMT10BQ6PF06 316 aaKnown RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 IL27RAQ6UWB1 636 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ENPP7Q6UWV6 458 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ADGRG6Q86SQ4 1221 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 MREGQ8N565 214 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 C2CD4AQ8NCU7 369 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 FBF1Q8TES7 1133 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 SCARF2Q96GP6 870 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 LGR4Q9BXB1 951 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ERVMER34-1Q9H9K5 563 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 TMEM74BQ9NUR3 256 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 ARGLU1Q9NWB6 273 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 MARCH4Q9P2E8 410 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 TXNDC16Q9P2K2 825 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 KLQ9UEF7 1012 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 CORO1CQ9ULV4 474 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 SLC6A14Q9UN76 642 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 SLC17A4Q9Y2C5 497 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 PCDHB1Q9Y5F3 818 aa11.43□□□□□ -0.58
LSM2-214ENST00000493387 DNMT3AQ9Y6K1 912 aaPredicted RBP11.43□□□□□ -0.58
LSM2-214ENST00000493387 NUAK1O60285 661 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 KCNJ13O60928 360 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 RASGRP1O95267 797 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 S1PR4O95977 384 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 TNFP01375 233 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 ESR1P03372 595 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 CFIP05156 583 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 SYPP08247 313 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 RPS3P23396 243 aaKnown RBP eCLIP11.42□□□□□ -0.582e-11■■■□□ 19.2
LSM2-214ENST00000493387 MPLP40238 635 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 SLC1A2P43004 574 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 LEPRP48357 1165 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 SRP54P61011 504 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 PPARDQ03181 441 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 SLC23A3Q6PIS1 610 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 MARK2Q7KZI7 788 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 PARGQ86W56 976 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 CTAGE3PQ8IX95 158 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 UBLCP1Q8WVY7 318 aaPredicted RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 CPNE1Q99829 537 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 NUSAP1Q9BXS6 441 aaKnown RBP11.42□□□□□ -0.58
LSM2-214ENST00000493387 CLPBQ9H078 707 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 OR2AG1Q9H205 316 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 IL1RAPL1Q9NZN1 696 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 ATXN10Q9UBB4 475 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 RABGEF1Q9UJ41 708 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 GNPTGQ9UJJ9 305 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 GPR34Q9UPC5 381 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 ANKRD6Q9Y2G4 727 aa11.42□□□□□ -0.58
LSM2-214ENST00000493387 TMEM98Q9Y2Y6 226 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms