RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	TWSG1	Q9GZX9	223 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	ISCU	Q9H1K1	167 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	CARD9	Q9H257	536 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	EPB41L1	Q9H4G0	881 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF768	Q9H5H4	540 aa	Known RBP	13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	RMI1	Q9H9A7	625 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	MRPL47	Q9HD33	250 aa	Known RBP	13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	POLH	Q9Y253	713 aa		13.5	□□□□□ -0.25
SAMM50-204	ENST00000493161	NBPF19	A0A087WUL8	3843 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	PIPSL	A2A3N6	862 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	OR5K4	A6NMS3	321 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	SPAG6	O75602	509 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	CREG1	O75629	220 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	RASSF9	O75901	435 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	BRAF	P15056	766 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	XRCC1	P18887	633 aa	Predicted RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	PRKCI	P41743	596 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	NOP2	P46087	812 aa	Known RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF165	P49910	485 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	ARSE	P51690	589 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	CLCNKA	P51800	687 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	PMS2	P54278	862 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	PPP1CA	P62136	330 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	KLHL30	Q0D2K2	578 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	KRT81	Q14533	505 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	ANKRD20A8P	Q5CZ79	823 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	ALS2CL	Q60I27	953 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	ADGRG6	Q86SQ4	1221 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	GPR26	Q8NDV2	337 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	FAM71B	Q8TC56	605 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	CT55	Q8WUE5	264 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	BRD8	Q9H0E9	1235 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	UCK1	Q9HA47	277 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	RTN4	Q9NQC3	1192 aa	Known RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	LNPEP	Q9UIQ6	1025 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	DNAJC16	Q9Y2G8	782 aa		13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.49	□□□□□ -0.25
SAMM50-204	ENST00000493161	OR52A4P	A6NMU1	304 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	MTX2	O75431	263 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	VIP	P01282	170 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	PIRT	P0C851	137 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	MYBL1	P10243	752 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	FGF5	P12034	268 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	AMD1	P17707	334 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	RPL10	P27635	214 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	CD86	P42081	329 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	DRG2	P55039	364 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	RPL26	P61254	145 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC10A2	Q12908	348 aa	Predicted RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	DNASE1L3	Q13609	305 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	DPYSL3	Q14195	570 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	GALNT3	Q14435	633 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	PIGH	Q14442	188 aa	Predicted RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	IL11RA	Q14626	422 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	PAFAH1B3	Q15102	231 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	KHDC1	Q4VXA5	237 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	TDRD12	Q587J7	1177 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	CACHD1	Q5VU97	1274 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	SASS6	Q6UVJ0	657 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	FAM92B	Q6ZTR7	304 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	LRRC49	Q8IUZ0	686 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF547	Q8IVP9	402 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	RAVER1	Q8IY67	606 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	NIPA2	Q8N8Q9	360 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	MLPH	Q9BV36	600 aa	Predicted RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	SPATA16	Q9BXB7	569 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	THAP2	Q9H0W7	228 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	TRIM39	Q9HCM9	518 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	ANO10	Q9NW15	660 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	PKD2L2	Q9NZM6	624 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	TRIM10	Q9UDY6	481 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	DNPEP	Q9ULA0	475 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	RPL26L1	Q9UNX3	145 aa	Known RBP	13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	PCDHGA6	Q9Y5G7	932 aa		13.48	□□□□□ -0.25
SAMM50-204	ENST00000493161	GOLGA6L3	A6NEY3	463 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	TTLL8	A6PVC2	850 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	ANKRD66	B4E2M5	251 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	CHUK	O15111	745 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	TOX3	O15405	576 aa	Predicted RBP	13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	SEMA7A	O75326	666 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	VPS4B	O75351	444 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	AGFG2	O95081	481 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	SLC25A14	O95258	325 aa	Predicted RBP	13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	ZNF7	P17097	686 aa	Predicted RBP	13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	CES1	P23141	567 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	CCNC	P24863	283 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	GJC1	P36383	396 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	RPS18	P62269	152 aa	Known RBP	13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	GBE1	Q04446	702 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	CHAF1B	Q13112	559 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	GPR18	Q14330	331 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	KCNAB1	Q14722	419 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	STX1A	Q16623	288 aa		13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	IFI16	Q16666	785 aa	Known RBP	13.47	□□□□□ -0.25
SAMM50-204	ENST00000493161	INSC	Q1MX18	579 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms