RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 CLPBQ9H078 707 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 TMEM168Q9H0V1 697 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 CDH19Q9H159 772 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 ERVMER34-1Q9H9K5 563 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 TMEM9BQ9NQ34 198 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 APOBEC3BQ9UH17 382 aaKnown RBP8.2□□□□□ -1.1
SF1-218ENST00000489544 CRLS1Q9UJA2 301 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 APPL1Q9UKG1 709 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 SLC17A4Q9Y2C5 497 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 BTBD3Q9Y2F9 522 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 ST14Q9Y5Y6 855 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 SLC30A1Q9Y6M5 507 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 CACNA1EQ15878 2313 aa8.2□□□□□ -1.1
SF1-218ENST00000489544 PTPRZ1P23471 2315 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 FAM186AA6NE01 2351 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TRBV5-4A0A0C4DH59 114 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 OR2AG2A6NM03 316 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 AGAP14A8MT82 685 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TOR1BO14657 336 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 FFAR2O15552 330 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SGTAO43765 313 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 NUAK1O60285 661 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 OR1I1O60431 355 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 PIAS1O75925 651 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 CDK14O94921 469 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TNFP01375 233 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 PYGLP06737 847 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 GIMD1P0DJR0 217 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 MYF5P13349 255 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 CD59P13987 128 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 DGKAP23743 735 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 AK4P27144 223 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 ECHS1P30084 290 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 AKT1P31749 480 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 RXRGP48443 463 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 ARCN1P48444 511 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 CCT8P50990 548 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 DRG2P55039 364 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 ARL4CP56559 192 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 PRAMEP78395 509 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 CACNG1Q06432 222 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TMEM115Q12893 351 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 ITGA9Q13797 1035 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 DNAJC21Q5F1R6 531 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 UBAP2Q5T6F2 1119 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 PDPK2PQ6A1A2 396 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 AFTPHQ6ULP2 937 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 UNC5AQ6ZN44 842 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 NLRP9Q7RTR0 991 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 KANSL1Q7Z3B3 1105 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TMEM135Q86UB9 458 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 CCDC25Q86WR0 208 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 PHYKPLQ8IUZ5 450 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 ZNF547Q8IVP9 402 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 NXPE1Q8N323 547 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 CLDN19Q8N6F1 224 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 RASGEF1AQ8N9B8 481 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 BBOF1Q8ND07 529 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 FBXO36Q8NEA4 188 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 ZNF548Q8NEK5 533 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 DDHD1Q8NEL9 900 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SAP25Q8TEE9 199 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SEC14L1Q92503 715 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SGF29Q96ES7 293 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 EBNA1BP2Q99848 306 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 SLC13A1Q9BZW2 595 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 TRIM39Q9HCM9 518 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SAYSD1Q9NPB0 183 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 ZDHHC18Q9NUE0 388 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 SLC17A6Q9P2U8 582 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 SLC23A2Q9UGH3 650 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.19□□□□□ -1.1
SF1-218ENST00000489544 ZNHIT2Q9UHR6 403 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 RIMKLBQ9ULI2 386 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 TEX264Q9Y6I9 313 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 PRSS21Q9Y6M0 314 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 V9GYY5 206 aaPredicted RBP8.19□□□□□ -1.1
SF1-218ENST00000489544 GVINP1Q7Z2Y8 2422 aa8.19□□□□□ -1.1
SF1-218ENST00000489544 BPTFQ12830 3046 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 E7ESA3 106 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 SMAPO00193 183 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 TRIM38O00635 465 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 CD3EAPO15446 510 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 GRID2O43424 1007 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 SH3BP5O60239 455 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 IVLP07476 585 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 ERVK-10P10266 1014 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 ACP5P13686 325 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 CTSEP14091 401 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 PGAM1P18669 254 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 MSH3P20585 1137 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 KELP23276 732 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 ACRV1P26436 265 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms