RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 CLCNKAP51800 687 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 TPM4P67936 248 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 FOXK1P85037 733 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 NIPAL4Q0D2K0 466 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 UBAP2LQ14157 1087 aaKnown RBP9.24□□□□□ -0.93
SNX17-207ENST00000489402 ZNF648Q5T619 568 aaPredicted RBP9.24□□□□□ -0.93
SNX17-207ENST00000489402 HGSNATQ68CP4 663 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 CYB5D1Q6P9G0 228 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 CRTC3Q6UUV7 619 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 LRRTM4Q86VH4 590 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 CCDC13Q8IYE1 715 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 SYN2Q92777 582 aaPredicted RBP9.24□□□□□ -0.93
SNX17-207ENST00000489402 HDAC11Q96DB2 347 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 STAMBPL1Q96FJ0 436 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 ABHD17AQ96GS6 310 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 C9orf72Q96LT7 481 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 PLEKHG4BQ96PX9 1271 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 ZSCAN5AQ9BUG6 496 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 UCK1Q9HA47 277 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 ZFYVE1Q9HBF4 777 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 TRIM39Q9HCM9 518 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 PRDM8Q9NQV8 689 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 KLC4Q9NSK0 619 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 DTLQ9NZJ0 730 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 TMEM63CQ9P1W3 806 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 ATXN10Q9UBB4 475 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 KCTD3Q9Y597 815 aa9.24□□□□□ -0.93
SNX17-207ENST00000489402 A0A087X0T9 212 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 PDZK1P1A8MUH7 402 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 KCNK1O00180 336 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 KMOO15229 486 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 RASSF9O75901 435 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 UBXN7O94888 489 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 JCHAINP01591 159 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 SLC4A1P02730 911 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 NTRK1P04629 796 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 FAM228BP0C875 321 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 ZNF8P17098 575 aaPredicted RBP9.23□□□□□ -0.93
SNX17-207ENST00000489402 TYRP1P17643 537 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 DLSTP36957 453 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 SEPHS1P49903 392 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 GFERP55789 205 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 DCDC1P59894 354 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 UBE2IP63279 158 aaKnown RBP9.23□□□□□ -0.93
SNX17-207ENST00000489402 KLRB1Q12918 225 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 GALNT3Q14435 633 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 IL11RAQ14626 422 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 NR1I3Q14994 352 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 IGFBP7Q16270 282 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 PLA2G4EQ3MJ16 856 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 ATP1A1-AS1Q5TC04 95 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 PDPK2PQ6A1A2 396 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 ALKBH5Q6P6C2 394 aaKnown RBP9.23□□□□□ -0.93
SNX17-207ENST00000489402 C6orf15Q6UXA7 325 aaPredicted RBP9.23□□□□□ -0.93
SNX17-207ENST00000489402 TMEM26Q6ZUK4 368 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 RASGRP3Q8IV61 690 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 TRAM1L1Q8N609 369 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 IQCDQ96DY2 449 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 MS4A3Q96HJ5 214 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 TGM7Q96PF1 710 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 GPR63Q9BZJ6 419 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 BRD8Q9H0E9 1235 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 POT1Q9NUX5 634 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 SIDT1Q9NXL6 827 aaKnown RBP9.23□□□□□ -0.93
SNX17-207ENST00000489402 CTTNBP2NLQ9P2B4 639 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 LCMT1Q9UIC8 334 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 KCND3Q9UK17 655 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 POLHQ9Y253 713 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 SPTA1P02549 2419 aa9.23□□□□□ -0.93
SNX17-207ENST00000489402 CHUKO15111 745 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 VEGFDO43915 354 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 KATNA1O75449 491 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 KIAA0754O94854 1291 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 PROSCO94903 275 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 NDUFA10O95299 355 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 MT-ND3P03897 115 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 MMP2P08253 660 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 ZNF7P17097 686 aaPredicted RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 VCLP18206 1134 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 IFI35P80217 286 aaPredicted RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 ZBED6P86452 979 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 GBE1Q04446 702 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 PPIDQ08752 370 aaKnown RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 SLC10A2Q12908 348 aaPredicted RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 GTF2H3Q13889 308 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 SEPT7Q16181 437 aaKnown RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 CCDC70Q6NSX1 233 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 ADGRG6Q86SQ4 1221 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 ATCAYQ86WG3 371 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 RBM12BQ8IXT5 1001 aaKnown RBP9.22□□□□□ -0.93
SNX17-207ENST00000489402 PQLC3Q8N755 202 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 GALNT6Q8NCL4 622 aa9.22□□□□□ -0.93
SNX17-207ENST00000489402 GPR26Q8NDV2 337 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms