RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 hCG_1807616A0A1W2PRN6 198 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 AGAP14A8MT82 685 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CDRT15L2A8MXV6 281 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 B4DLN1 442 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 HNRNPCL3B7ZW38 293 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 HS3ST1O14792 307 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 MID1O15344 667 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 DAB1O75553 588 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 PMS2P2O95744 297 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 UQCRHP07919 91 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SRPRAP08240 638 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 HNRNPCL4P0DMR1 293 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ACTN1P12814 892 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 PORP16435 677 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ANXA7P20073 488 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 MSNP26038 577 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 HOXA13P31271 388 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 UBA7P41226 1012 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 TMPOP42166 694 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CAMPP49913 170 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 KIF19Q2TAC6 998 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ASTE1Q2TB18 679 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF805Q5CZA5 627 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CFAP58Q5T655 872 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ARMC3Q5W041 872 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 KIAA0930Q6ICG6 404 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 JADE1Q6IE81 842 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SZRD1Q7Z422 152 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SDCCAG8Q86SQ7 713 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 GPR180Q86V85 440 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CHERPQ8IWX8 916 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 BEST3Q8N1M1 668 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 C17orf53Q8N3J3 647 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SMRP1Q8NCR6 262 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 OR1J2Q8NGS2 313 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 EXOC6Q8TAG9 804 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 HMGCLL1Q8TB92 370 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 JAKMIP2Q96AA8 810 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF385AQ96PM9 386 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 NUDCD1Q96RS6 583 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SIL1Q9H173 461 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 PCDH9Q9HC56 1237 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 LTB4R2Q9NPC1 389 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 OGFRQ9NZT2 677 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CHMP5Q9NZZ3 219 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 ACSL5Q9ULC5 683 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 KLHL20Q9Y2M5 609 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 KIF3AQ9Y496 699 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 SNX8Q9Y5X2 465 aa3.82□□□□□ -1.8
ECHDC1-217ENST00000488087 CTTNBP2Q8WZ74 1663 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SPATA31E1Q6ZUB1 1445 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 MIA2Q96PC5 1412 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 NCOA3Q9Y6Q9 1424 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SAA2-SAA4A0A096LPE2 208 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 EIF4E1BA6NMX2 242 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SRRM3A6NNA2 597 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 C4orf47A7E2U8 309 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HNRNPCL2B2RXH8 293 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 ACOT8O14734 319 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 OGG1O15527 345 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 TMCC2O75069 709 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 KCNK5O95279 499 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 OR2C1O95371 312 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HIST1H2ABP04908 130 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 ICAM1P05362 532 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 LINC00271P0C7V0 271 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 FGF3P11487 239 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 GABRB1P18505 474 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HIST1H2ADP20671 130 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 GNL1P36915 607 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 GARSP41250 739 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SNX16P57768 344 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 TAS2R38P59533 333 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 NUCB1Q02818 461 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SYCP1Q15431 976 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 CCDC96Q2M329 555 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 PCGF3Q3KNV8 242 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SOWAHCQ53LP3 525 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 C9orf57Q5W0N0 161 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 CAPRIN2Q6IMN6 1127 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 PRSS57Q6UWY2 283 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 CLEC17AQ6ZS10 378 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HIST3H2AQ7L7L0 130 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 ARMC9Q7Z3E5 817 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SFR1Q86XK3 245 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 ODF3L1Q8IXM7 274 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF34Q8IZ26 560 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 PDCL2Q8N4E4 241 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HJURPQ8NCD3 748 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 KCNH5Q8NCM2 988 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 HM13Q8TCT9 377 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 DUSP19Q8WTR2 217 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 BICD1Q96G01 975 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 IGSF21Q96ID5 467 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 QRFPRQ96P65 431 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 DUX5Q96PT3 197 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 GAD1Q99259 594 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms