RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TRIM72Q6ZMU5 477 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 FAM92BQ6ZTR7 304 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 TSPAN33Q86UF1 283 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 RAB43Q86YS6 212 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 TMEM126BQ8IUX1 230 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 CBARPQ8N350 705 aaPredicted RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 CISD2Q8N5K1 135 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 GLIS1Q8NBF1 620 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 ST6GALNAC3Q8NDV1 305 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 UBXN4Q92575 508 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 MR1Q95460 341 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 C19orf60Q96EN9 201 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 RUFY1Q96T51 708 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 RAB33BQ9H082 229 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 CARD9Q9H257 536 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 RWDD2AQ9UIY3 292 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 AP4E1Q9UPM8 1137 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 PRKAB1Q9Y478 270 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 COPG1Q9Y678 874 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 DNHD1Q96M86 4753 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 A6NL46 340 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PDZK1P1A8MUH7 402 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 GPR89AB7ZAQ6 455 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 F8VZ95 297 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 BIN1O00499 593 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 LRRTM2O43300 516 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 GRID2O43424 1007 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 SCRG1O75711 98 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PGLSO95336 258 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 TIAF1O95411 115 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
PDPN-205ENST00000487038 RAB40ALP0C0E4 278 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 GPR89BP0CG08 455 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 CTPS1P17812 591 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 CA4P22748 312 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 CLCNKAP51800 687 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 ZNF135P52742 658 aaPredicted RBP7.53□□□□□ -1.2
PDPN-205ENST00000487038 ZNF143P52747 638 aaPredicted RBP7.53□□□□□ -1.2
PDPN-205ENST00000487038 EPHB1P54762 984 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 CDR2Q01850 454 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 SLC10A7Q0GE19 358 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 TRAF2Q12933 501 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 SYCP1Q15431 976 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 INSCQ1MX18 579 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 SP5Q6BEB4 398 aaPredicted RBP7.53□□□□□ -1.2
PDPN-205ENST00000487038 PWWP2BQ6NUJ5 590 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 DNAJC24Q6P3W2 148 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 KLHL35Q6PF15 583 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 WDR59Q6PJI9 974 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 KMT5CQ86Y97 462 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 AOPEPQ8N6M6 819 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 ADAMTS17Q8TE56 1095 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 RSC1A1Q92681 617 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 SCAMP4Q969E2 229 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 ZNF514Q96K75 400 aaPredicted RBP7.53□□□□□ -1.2
PDPN-205ENST00000487038 MCEEQ96PE7 176 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PLEKHG4BQ96PX9 1271 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 MGME1Q9BQP7 344 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 FANCEQ9HB96 536 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 KLC4Q9NSK0 619 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 HAUS2Q9NVX0 235 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 ADAM22Q9P0K1 906 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PADI2Q9Y2J8 665 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PPIL1Q9Y3C6 166 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PCSK5Q92824 1860 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 FER1L5A0AVI2 2057 aa7.53□□□□□ -1.2
PDPN-205ENST00000487038 PIKFYVEQ9Y2I7 2098 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 A0A0J9YYE9 177 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 SIGLEC16A6NMB1 481 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 F5H423 210 aaPredicted RBP7.52□□□□□ -1.21
PDPN-205ENST00000487038 PES1O00541 588 aaKnown RBP7.52□□□□□ -1.21
PDPN-205ENST00000487038 KIF1CO43896 1103 aaKnown RBP7.52□□□□□ -1.21
PDPN-205ENST00000487038 NUAK1O60285 661 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 JCHAINP01591 159 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 TRBC1P01850 177 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 IGHEP01854 428 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 UCHL3P15374 230 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 ERCC2P18074 760 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 TNFAIP3P21580 790 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 GLRBP48167 497 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 CDH6P55285 790 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 TUBB4BP68371 445 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 LAMB3Q13751 1172 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 TUBB2AQ13885 445 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 TMTC4Q5T4D3 741 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 KLHDC7AQ5VTJ3 777 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 DCUN1D2Q6PH85 259 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 ARHGAP36Q6ZRI8 547 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 RFX8Q6ZV50 586 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 ARHGAP12Q8IWW6 846 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 ARFGAP1Q8N6T3 406 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 ENDOVQ8N8Q3 282 aaKnown RBP7.52□□□□□ -1.21
PDPN-205ENST00000487038 CLEC1AQ8NC01 280 aa7.52□□□□□ -1.21
PDPN-205ENST00000487038 OR8K5Q8NH50 307 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms