RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SNX3O60493 162 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UGT1A9O60656 530 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 RFPL1O75677 317 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ADH1BP00325 375 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UGT2B4P06133 528 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 GSTA1P08263 222 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3HP0C7X1 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TROVE2P10155 538 aaKnown RBP eCLIP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TAC1P20366 129 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 C5AR1P21730 350 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 NMBRP28336 390 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 OXTRP30559 389 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ALDH3A1P30838 453 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 POLD2P49005 469 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 LIMK2P53671 638 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ARHGAP8P85298 464 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 DSC2Q02487 901 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 CDK18Q07002 472 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ZKSCAN8Q15776 578 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 DBN1Q16643 649 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 DUOXA1Q1HG43 343 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 INSCQ1MX18 579 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KIF19Q2TAC6 998 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TAF1BQ53T94 588 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 WDR45BQ5MNZ6 344 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TEDDM1Q5T9Z0 273 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 RNF187Q5TA31 235 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ATG16L1Q676U5 607 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3GQ6DHY5 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KIAA0930Q6ICG6 404 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3CQ6IPX1 549 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 BLOC1S3Q6QNY0 202 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KIAA0408Q6ZU52 694 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KDELC2Q7Z4H8 507 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 SPATA21Q7Z572 469 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 YTHDF3Q7Z739 585 aaKnown RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PIGWQ7Z7B1 504 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UNC5BQ8IZJ1 945 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 TBC1D3Q8IZP1 549 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KDM1BQ8NB78 822 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PPP1R14CQ8TAE6 165 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 RAB3IL1Q8TBN0 382 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF75CPQ92670 426 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FOXJ1Q92949 421 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PEX13Q92968 403 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FEM1CQ96JP0 617 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FCRL3Q96P31 734 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FAM111AQ96PZ2 611 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PSKH2Q96QS6 385 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 MGME1Q9BQP7 344 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 MANSC1Q9H8J5 431 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UGT1A7Q9HAW7 530 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UGT1A10Q9HAW8 530 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 UGT1A8Q9HAW9 530 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PDFQ9HBH1 243 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 HECAQ9UBI9 543 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 LHX3Q9UBR4 397 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 IL36AQ9UHA7 158 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 EVLQ9UI08 416 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-216ENST00000484087 MID2Q9UJV3 735 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 SLC6A14Q9UN76 642 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 NCKAP1Q9Y2A7 1128 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 BTBD3Q9Y2F9 522 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 ARL2BPQ9Y2Y0 163 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 PLLPQ9Y342 182 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 SNX11Q9Y5W9 270 aa6.91□□□□□ -1.3
BRCA1-216ENST00000484087 FREM2Q5SZK8 3169 aa6.9□□□□□ -1.3
BRCA1-216ENST00000484087 A0A0U1RQS6 177 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1B0GTW7 788 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 LOC285095A0A1B0GVY8 99 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1W2PQU0 124 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 TPP1O14773 563 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 BIRC5O15392 142 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SLC31A1O15431 190 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 PLRG1O43660 514 aaKnown RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 EDF1O60869 148 aaKnown RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RNGTTO60942 597 aaKnown RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 VAPBO95292 243 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 NDST3O95803 873 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SERPINB4P48594 390 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SCNN1BP51168 640 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 NOVA1P51513 510 aaKnown RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ATXN3P54252 364 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 SLC12A2P55011 1212 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 CLDN2P57739 230 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RHOAP61586 193 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 PRAMEP78395 509 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 ZBTB16Q05516 673 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 IFT88Q13099 833 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 FGL2Q14314 439 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 PTPRRQ15256 657 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 CYTH1Q15438 398 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC153Q494R4 210 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 INO80DQ53TQ3 878 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-216ENST00000484087 CARD16Q5EG05 197 aa6.9□□□□□ -1.31
BRCA1-216ENST00000484087 RALGPS1Q5JS13 557 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms