RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 LRP8Q14114 963 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 KHDC1Q4VXA5 237 aaKnown RBP19.52■□□□□ 0.72
LIME1-205ENST00000480139 GLE1Q53GS7 698 aaKnown RBP19.52■□□□□ 0.72
LIME1-205ENST00000480139 PYCR3Q53H96 274 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 RD3Q7Z3Z2 195 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 TMEM135Q86UB9 458 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 GALNT13Q8IUC8 556 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 PDIK1LQ8N165 341 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 GDAP1Q8TB36 358 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 GPBAR1Q8TDU6 330 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 LMX1AQ8TE12 382 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 SEC14L1Q92503 715 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 OR2M4Q96R27 311 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 CLPBQ9H078 707 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 OR2AG1Q9H205 316 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 L2HGDHQ9H9P8 463 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 DLL3Q9NYJ7 618 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 NLGN3Q9NZ94 848 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 MOSPD1Q9UJG1 213 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 DNAH14Q0VDD8 3507 aa19.52■□□□□ 0.71
LIME1-205ENST00000480139 IGLV3-16A0A075B6K0 115 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 GOT2P00505 430 aaKnown RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 GIMD1P0DJR0 217 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 ZNF8P17098 575 aaPredicted RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 CSRP1P21291 193 aaKnown RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 NMBRP28336 390 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 GNPDA1P46926 289 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 CAV1Q03135 178 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 HIF1AQ16665 826 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 ZRANB3Q5FWF4 1079 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 FNBP1LQ5T0N5 605 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 KIAA0930Q6ICG6 404 aaPredicted RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 CASC4Q6P4E1 433 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 LVRNQ6Q4G3 990 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 GKN2Q86XP6 184 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 AGGF1Q8N302 714 aaeCLIP19.51■□□□□ 0.71
LIME1-205ENST00000480139 NOA1Q8NC60 698 aaKnown RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 OR4L1Q8NH43 312 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 OR4C6Q8NH72 309 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 BAHD1Q8TBE0 780 aaPredicted RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.51■□□□□ 0.71
LIME1-205ENST00000480139 LRRC39Q96DD0 335 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 MFSD3Q96ES6 412 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 ZNF514Q96K75 400 aaPredicted RBP19.51■□□□□ 0.71
LIME1-205ENST00000480139 NAT9Q9BTE0 207 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 LRRC1Q9BTT6 524 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 DUSP23Q9BVJ7 150 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 TMEM168Q9H0V1 697 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 DPH5Q9H2P9 285 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 CAAP1Q9H8G2 361 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 ARFGAP3Q9NP61 516 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 ZDHHC3Q9NYG2 299 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 GRHL1Q9NZI5 618 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 PCOLCE2Q9UKZ9 415 aa19.51■□□□□ 0.71
LIME1-205ENST00000480139 CFAP54Q96N23 3096 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 GRID2O43424 1007 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 SH3BP5O60239 455 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 CBFA2T3O75081 653 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 MTX2O75431 263 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 USP1O94782 785 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 CDK14O94921 469 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 ALPPL2P10696 532 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 PAMP19021 973 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 ACRV1P26436 265 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 DEKP35659 375 aaKnown RBP19.5■□□□□ 0.71
LIME1-205ENST00000480139 ARL4CP56559 192 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 ILF3Q12906 894 aaKnown RBP eCLIP19.5■□□□□ 0.71
LIME1-205ENST00000480139 GTF2H3Q13889 308 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 ZNF648Q5T619 568 aaPredicted RBP19.5■□□□□ 0.71
LIME1-205ENST00000480139 LYPLAL1Q5VWZ2 237 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 CERS6Q6ZMG9 384 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 MARK2Q7KZI7 788 aaKnown RBP19.5■□□□□ 0.71
LIME1-205ENST00000480139 SERPINA9Q86WD7 417 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 CCNJLQ8IV13 435 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 PIANPQ8IYJ0 282 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 OR6P1Q8NGX9 317 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 STAMBPL1Q96FJ0 436 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 TTC25Q96NG3 672 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 COPS8Q99627 209 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 GSDMCQ9BYG8 508 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 GPR34Q9UPC5 381 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 BTBD3Q9Y2F9 522 aa19.5■□□□□ 0.71
LIME1-205ENST00000480139 OR51F1A6NGY5 319 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 BHMG1C9JSJ3 638 aaPredicted RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 RALBP11234 206 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 MSH3P20585 1137 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 ARNTP27540 789 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 DHX9Q08211 1270 aaKnown RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 C1orf61Q13536 156 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 ITIH4Q14624 930 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 ANKRD20A4Q4UJ75 823 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 MSS51Q4VC12 460 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 AARS2Q5JTZ9 985 aaKnown RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 LRRTM4Q86VH4 590 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 RHBDD1Q8TEB9 315 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 SETD7Q8WTS6 366 aaKnown RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 SCG3Q8WXD2 468 aaKnown RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 ART4Q93070 314 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 EBNA1BP2Q99848 306 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms