RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PIP4P1Q86T03 277 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 GKN2Q86XP6 184 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 HDAC10Q969S8 669 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 TBRG4Q969Z0 631 aaKnown RBP eCLIP29.24■■■□□ 2.27
HOXB3-208ENST00000476342 DUSP23Q9BVJ7 150 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 TMEM168Q9H0V1 697 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 DPH5Q9H2P9 285 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 TREX1Q9NSU2 369 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 DLL3Q9NYJ7 618 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 NLGN3Q9NZ94 848 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 GPSM3Q9Y4H4 160 aa29.24■■■□□ 2.27
HOXB3-208ENST00000476342 ZNF500O60304 480 aaPredicted RBP29.23■■■□□ 2.27
HOXB3-208ENST00000476342 AKT1P31749 480 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 ILF3Q12906 894 aaKnown RBP eCLIP29.23■■■□□ 2.27
HOXB3-208ENST00000476342 PYCR3Q53H96 274 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 DNAJC21Q5F1R6 531 aaKnown RBP29.23■■■□□ 2.27
HOXB3-208ENST00000476342 ZNF648Q5T619 568 aaPredicted RBP29.23■■■□□ 2.27
HOXB3-208ENST00000476342 PDIK1LQ8N165 341 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 NXPE1Q8N323 547 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 MMGT1Q8N4V1 131 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 OR6P1Q8NGX9 317 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 WHRNQ9P202 907 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 ZNHIT2Q9UHR6 403 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 PCOLCE2Q9UKZ9 415 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 BTBD3Q9Y2F9 522 aa29.23■■■□□ 2.27
HOXB3-208ENST00000476342 CCDC162PA2VCL2 907 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 LMO7DNF2Z398 122 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 FFAR2O15552 330 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 ANXA6P08133 673 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 ZNF8P17098 575 aaPredicted RBP29.22■■■□□ 2.27
HOXB3-208ENST00000476342 CSRP1P21291 193 aaKnown RBP29.22■■■□□ 2.27
HOXB3-208ENST00000476342 NMBRP28336 390 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 DUPD1Q68J44 220 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 TAS2R42Q7RTR8 314 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 MPP5Q8N3R9 675 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 EID2Q8N6I1 236 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 OR4C6Q8NH72 309 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 SCG3Q8WXD2 468 aaKnown RBP29.22■■■□□ 2.27
HOXB3-208ENST00000476342 GSDMCQ9BYG8 508 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 CLPBQ9H078 707 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 FAM96AQ9H5X1 160 aa29.22■■■□□ 2.27
HOXB3-208ENST00000476342 ARID1BQ8NFD5 2236 aaPredicted RBP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 TRBV5-4A0A0C4DH59 114 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 FAM237BA0A1B0GVD1 139 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 ESPNB1AK53 854 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 TPP1O14773 563 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 CHUKO15111 745 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 GRID2O43424 1007 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 GOT2P00505 430 aaKnown RBP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 RALBP11234 206 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 PAMP19021 973 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 MSH3P20585 1137 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 LRP8Q14114 963 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 PUM1Q14671 1186 aaKnown RBP eCLIP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 TCEA2Q15560 299 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 KHDC1Q4VXA5 237 aaKnown RBP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 DNTTIP2Q5QJE6 756 aaKnown RBP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 OR4L1Q8NH43 312 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 HEXDCQ8WVB3 486 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 MFSD3Q96ES6 412 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 SGSM3Q96HU1 749 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 SIGLEC10Q96LC7 697 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 COPS8Q99627 209 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 MAD1L1Q9Y6D9 718 aa29.21■■■□□ 2.27
HOXB3-208ENST00000476342 COL5A1P20908 1838 aaPredicted RBP29.21■■■□□ 2.27
HOXB3-208ENST00000476342 CFAP99D6REC4 459 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 CELA2BP08218 269 aaPredicted RBP29.2■■■□□ 2.27
HOXB3-208ENST00000476342 ACRV1P26436 265 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 FOXN2P32314 431 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 CA5AP35218 305 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 LVRNQ6Q4G3 990 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 TAF8Q7Z7C8 310 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 DEFB124Q8NES8 71 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 GPBAR1Q8TDU6 330 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 DCUN1D1Q96GG9 259 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 TTC1Q99614 292 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 CDC6Q99741 560 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 LRRC1Q9BTT6 524 aa29.2■■■□□ 2.27
HOXB3-208ENST00000476342 OR51F1A6NGY5 319 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 ARL4CP56559 192 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 HIF1AQ16665 826 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 DEFB133Q30KQ1 61 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 FASTKD1Q53R41 847 aaKnown RBP29.2■■■□□ 2.26
HOXB3-208ENST00000476342 PSAPL1Q6NUJ1 521 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 CHST15Q7LFX5 561 aaPredicted RBP29.2■■■□□ 2.26
HOXB3-208ENST00000476342 LRRTM4Q86VH4 590 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 SERPINA9Q86WD7 417 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 STAMBPL1Q96FJ0 436 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 CAMK1GQ96NX5 476 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 ZDHHC3Q9NYG2 299 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 FTSJ1Q9UET6 329 aa29.2■■■□□ 2.26
HOXB3-208ENST00000476342 ZFC3H1O60293 1989 aaKnown RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 KMOO15229 486 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 YY2O15391 372 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 CBFA2T3O75081 653 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 GIMD1P0DJR0 217 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 CTBSQ01459 385 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 DHX9Q08211 1270 aaKnown RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 BBS9Q3SYG4 887 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 FNBP1LQ5T0N5 605 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 421.5 ms