RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 HIF1AQ16665 826 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 GLE1Q53GS7 698 aaKnown RBP17.94■□□□□ 0.46
SNRPB-203ENST00000474384 HP1BP3Q5SSJ5 553 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-203ENST00000474384 LDLRAP1Q5SW96 308 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 PSAPL1Q6NUJ1 521 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 AFTPHQ6ULP2 937 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 PIANPQ8IYJ0 282 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 NXPE1Q8N323 547 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 SLC25A45Q8N413 288 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 DDHD1Q8NEL9 900 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 OR4L1Q8NH43 312 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 NETO1Q8TDF5 533 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 LMX1AQ8TE12 382 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 ART4Q93070 314 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 ULK4Q96C45 1275 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 STAMBPL1Q96FJ0 436 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 SCARF2Q96GP6 870 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-203ENST00000474384 FCRL3Q96P31 734 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-203ENST00000474384 LRRC61Q9BV99 259 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 SPASTQ9UBP0 616 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 ZNHIT2Q9UHR6 403 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 PRKAB1Q9Y478 270 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 PCDHGB2Q9Y5G2 931 aa17.94■□□□□ 0.46
SNRPB-203ENST00000474384 PCYT1BQ9Y5K3 369 aaPredicted RBP17.94■□□□□ 0.46
SNRPB-203ENST00000474384 FAM237BA0A1B0GVD1 139 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 DNAJC6O75061 913 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 CDK14O94921 469 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 CD59P13987 128 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 ZNF8P17098 575 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-203ENST00000474384 FOXN2P32314 431 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 SLC14A1Q13336 389 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 SUZ12Q15022 739 aaKnown RBP17.93■□□□□ 0.46
SNRPB-203ENST00000474384 ANKRD20A4Q4UJ75 823 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 KANSL1Q7Z3B3 1105 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 SERPINA9Q86WD7 417 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 IGDCC3Q8IVU1 814 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 PNPLA1Q8N8W4 532 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 ZNF548Q8NEK5 533 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-203ENST00000474384 ZNF669Q96BR6 464 aaPredicted RBP17.93■□□□□ 0.46
SNRPB-203ENST00000474384 TTC25Q96NG3 672 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 CLPBQ9H078 707 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 TMEM168Q9H0V1 697 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 EPB41L5Q9HCM4 733 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 GPSM3Q9Y4H4 160 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 RPS6KL1Q9Y6S9 549 aa17.93■□□□□ 0.46
SNRPB-203ENST00000474384 TRBV5-4A0A0C4DH59 114 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 AQP9O43315 295 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 VEGFDO43915 354 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 NUAK1O60285 661 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 VAPBO95292 243 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 CELA2BP08218 269 aaPredicted RBP17.92■□□□□ 0.46
SNRPB-203ENST00000474384 MSH3P20585 1137 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 ACRV1P26436 265 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 AKT1P31749 480 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 ELK3P41970 407 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 CAV1Q03135 178 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 SMAD1Q15797 465 aaKnown RBP17.92■□□□□ 0.46
SNRPB-203ENST00000474384 PYCR3Q53H96 274 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 FASTKD1Q53R41 847 aaKnown RBP17.92■□□□□ 0.46
SNRPB-203ENST00000474384 ZDHHC24Q6UX98 284 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 DBX2Q6ZNG2 339 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 TMEM135Q86UB9 458 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 GALNT13Q8IUC8 556 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 SEC14L1Q92503 715 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 EBNA1BP2Q99848 306 aaKnown RBP17.92■□□□□ 0.46
SNRPB-203ENST00000474384 RMI1Q9H9A7 625 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 PLEKHM1Q9Y4G2 1056 aa17.92■□□□□ 0.46
SNRPB-203ENST00000474384 ASCC3Q8N3C0 2202 aaKnown RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 GPR89AB7ZAQ6 455 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 BHMG1C9JSJ3 638 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 CD3EAPO15446 510 aaKnown RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 FFAR2O15552 330 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 GRID2O43424 1007 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 USP1O94782 785 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 POLBP06746 335 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 GPR89BP0CG08 455 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 PGAM1P18669 254 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 PAMP19021 973 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 ARNTP27540 789 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 PDIA2Q13087 525 aaKnown RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 GTF2H3Q13889 308 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 ELOCQ15369 112 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 KIAA0930Q6ICG6 404 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 ANKMY2Q8IV38 441 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 RASGEF1AQ8N9B8 481 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 CCL4L1Q8NHW4 92 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 FBXO25Q8TCJ0 367 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 SETD7Q8WTS6 366 aaKnown RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 NAT14Q8WUY8 206 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 CCDC97Q96F63 343 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 DCUN1D1Q96GG9 259 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 SGSM3Q96HU1 749 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 OR2M4Q96R27 311 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 COPS8Q99627 209 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 CATSPERZQ9NTU4 200 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 ZDHHC3Q9NYG2 299 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 MARCH4Q9P2E8 410 aaPredicted RBP17.91■□□□□ 0.46
SNRPB-203ENST00000474384 CHMP2BQ9UQN3 213 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 BTBD3Q9Y2F9 522 aa17.91■□□□□ 0.46
SNRPB-203ENST00000474384 TEX264Q9Y6I9 313 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms