RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 OR6P1Q8NGX9 317 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 PEX13Q92968 403 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 HDAC10Q969S8 669 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX56-209ENST00000473924 DCUN1D1Q96GG9 259 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 SCARF2Q96GP6 870 aaPredicted RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 CNDP2Q96KP4 475 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 ZNF778Q96MU6 729 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 FAM96AQ9H5X1 160 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 SMOXQ9NWM0 555 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 SLC2A6Q9UGQ3 507 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 TMPRSS11EQ9UL52 423 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 RIMKLBQ9ULI2 386 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 UTP11Q9Y3A2 253 aaKnown RBP12.28□□□□□ -0.44
DDX56-209ENST00000473924 PRKAB1Q9Y478 270 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 MRFAP1Q9Y605 127 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 LRP4O75096 1905 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 CFAP54Q96N23 3096 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 CEP250Q9BV73 2442 aa12.28□□□□□ -0.44
DDX56-209ENST00000473924 MAGEB16A2A368 324 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 SMAPO00193 183 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 TRIM38O00635 465 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 TPP1O14773 563 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 SIGLEC6O43699 453 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CBFA2T3O75081 653 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 GOT2P00505 430 aaKnown RBP12.27□□□□□ -0.45
DDX56-209ENST00000473924 RALBP11234 206 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 IVDP26440 423 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 ARSDP51689 593 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 DAB2P98082 770 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CTBSQ01459 385 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CACNG1Q06432 222 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 LRP8Q14114 963 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 MORF4L2Q15014 288 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 KHDC1Q4VXA5 237 aaKnown RBP12.27□□□□□ -0.45
DDX56-209ENST00000473924 ZCCHC8Q6NZY4 707 aaKnown RBP12.27□□□□□ -0.45
DDX56-209ENST00000473924 C8orf74Q6P047 294 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 SLC30A9Q6PML9 568 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 AFTPHQ6ULP2 937 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CRTC3Q6UUV7 619 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 LRRTM4Q86VH4 590 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 TRAPPC5Q8IUR0 188 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 NXPE1Q8N323 547 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 BBOF1Q8ND07 529 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 FAM46DQ8NEK8 389 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 OR13J1Q8NGT2 312 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CCL4L1Q8NHW4 92 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 GLMNQ92990 594 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 TTC1Q99614 292 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 COPS8Q99627 209 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 ERP44Q9BS26 406 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 DPH5Q9H2P9 285 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 DPEP2Q9H4A9 486 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 MRM3Q9HC36 420 aaKnown RBP12.27□□□□□ -0.45
DDX56-209ENST00000473924 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 SOX13Q9UN79 622 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 SNX24Q9Y343 169 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 MAD1L1Q9Y6D9 718 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.45
DDX56-209ENST00000473924 CTAGE15A4D2H0 777 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 CFAP99D6REC4 459 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 GIPC1O14908 333 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 KMOO15229 486 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 TNFSF14O43557 240 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 CTAGE8P0CG41 777 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 GIMD1P0DJR0 217 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 ACP5P13686 325 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 PAMP19021 973 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 PSMA3P25788 255 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 AK4P27144 223 aaPredicted RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 NMBRP28336 390 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 CA5AP35218 305 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 ACTR1BP42025 376 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 CDKN1CP49918 316 aaPredicted RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 ITGA8P53708 1063 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 ACTR1AP61163 376 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 SIM1P81133 766 aaPredicted RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 ACVR1Q04771 509 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 CALCOCO2Q13137 446 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 INSCQ1MX18 579 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 PLA2G4EQ3MJ16 856 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 FASTKD1Q53R41 847 aaKnown RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 DNAJC21Q5F1R6 531 aaKnown RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 PPM1JQ5JR12 505 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 DNTTIP2Q5QJE6 756 aaKnown RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 C6orf132Q5T0Z8 1188 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 ARMC3Q5W041 872 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 HIBCHQ6NVY1 386 aaPredicted RBP12.26□□□□□ -0.45
DDX56-209ENST00000473924 CES3Q6UWW8 571 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 DET1Q7L5Y6 550 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 DGLUCYQ7Z3D6 616 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 CTAGE6Q86UF2 777 aa12.26□□□□□ -0.45
DDX56-209ENST00000473924 SERPINA9Q86WD7 417 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms