RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 TRAM1L1Q8N609 369 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 SNIP1Q8TAD8 396 aaKnown RBP19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 GRAMD1AQ96CP6 724 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 ZSCAN5AQ9BUG6 496 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 OR2AG1Q9H205 316 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 RAD18Q9NS91 495 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 ATXN10Q9UBB4 475 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 KCNK6Q9Y257 313 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 ACACAQ13085 2346 aa19.66■□□□□ 0.74
UBQLN4-203ENST00000472638 CHD6Q8TD26 2715 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 CCDC187A0A096LP49 1063 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 CTAGE15A4D2H0 777 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 KCNN4O15554 427 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 B4GAT1O43505 415 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 BUD23O43709 281 aaKnown RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 LIASO43766 372 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 EML2O95834 649 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 AGTP01019 485 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 CTAGE8P0CG41 777 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 PNLIPP16233 465 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 ZNF8P17098 575 aaPredicted RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 RBMS1P29558 406 aaKnown RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 ABCG1P45844 678 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 FNTAP49354 379 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 MPP3Q13368 585 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 PEX6Q13608 980 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 LRP8Q14114 963 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 SLC1A5Q15758 541 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 CTAGE6Q86UF2 777 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 CTAGE4Q8IX94 777 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 TTC30BQ8N4P2 665 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 WDR36Q8NI36 951 aaKnown RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 SLC35B2Q8TB61 432 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 BLOC1S5Q8TDH9 187 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 GLYATL1Q969I3 302 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 PRR11Q96HE9 360 aaPredicted RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 ZNF578Q96N58 590 aaPredicted RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 RUNDC3BQ96NL0 473 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 SRPK1Q96SB4 655 aaKnown RBP19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 FERMT1Q9BQL6 677 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 GORASP1Q9BQQ3 440 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 FICDQ9BVA6 458 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 FSD1LQ9BXM9 530 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 GBA3Q9H227 469 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 ASCL3Q9NQ33 180 aa19.65■□□□□ 0.74
UBQLN4-203ENST00000472638 URB1O60287 2271 aaKnown RBP19.64■□□□□ 0.74
UBQLN4-203ENST00000472638 PPM1DO15297 605 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 SNX2O60749 519 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 MTX2O75431 263 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 DXOO77932 396 aaKnown RBP19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 EPOP01588 193 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 MAP9Q49MG5 647 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ANKRD20A2Q5SQ80 823 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ANKRD20A1Q5TYW2 823 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ANKRD20A3Q5VUR7 823 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 CRTC3Q6UUV7 619 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 USP53Q70EK8 1073 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 TMPRSS9Q7Z410 1059 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ADGRG6Q86SQ4 1221 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 C1orf54Q8WWF1 131 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 ATG4AQ8WYN0 398 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 APOL2Q9BQE5 337 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 CARD6Q9BX69 1037 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 RDH14Q9HBH5 336 aa19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 NFKBIL1Q9UBC1 381 aaPredicted RBP19.64■□□□□ 0.73
UBQLN4-203ENST00000472638 GRID2O43424 1007 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 NUAK1O60285 661 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 STK10O94804 968 aaKnown RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TNFSF15O95150 251 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 HGFP14210 728 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 HLA-DPA1P20036 260 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PSMB4P28070 264 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 GEMP55040 296 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PCBP4P57723 403 aaKnown RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 OLIG2Q13516 323 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 OASLQ15646 514 aaKnown RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PLA2G4EQ3MJ16 856 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 RAB11FIP2Q7L804 512 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 GLT6D1Q7Z4J2 308 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 ZNF438Q7Z4V0 828 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PDZD3Q86UT5 571 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 ZNF761Q86XN6 746 aaPredicted RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PHYKPLQ8IUZ5 450 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 FBXO39Q8N4B4 442 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 CCDC110Q8TBZ0 833 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 SLC37A2Q8TED4 501 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 MAGOHBQ96A72 148 aaKnown RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 LIN37Q96GY3 246 aaPredicted RBP19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TMEM74Q96NL1 305 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 SLC46A1Q96NT5 459 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 STRADBQ9C0K7 418 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TRABDQ9H4I3 376 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 RMI1Q9H9A7 625 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TRIM39Q9HCM9 518 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 THSD1Q9NS62 852 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TBC1D29Q9UFV1 150 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 TMPRSS11EQ9UL52 423 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 PCDHGA8Q9Y5G5 932 aa19.63■□□□□ 0.73
UBQLN4-203ENST00000472638 CELSR3Q9NYQ7 3312 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms