RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SDC3O75056 442 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 DNAJC6O75061 913 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CDK14O94921 469 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 FUCA1P04066 466 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 RALBP11234 206 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 RPL21P46778 160 aaKnown RBP16.76■□□□□ 0.27
USP39-211ENST00000465282 POLD2P49005 469 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 ITGA8P53708 1063 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CRADDP78560 199 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CAV1Q03135 178 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 GTF2H3Q13889 308 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 PUM1Q14671 1186 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP39-211ENST00000465282 GPRC6AQ5T6X5 926 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CASC4Q6P4E1 433 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 DOK6Q6PKX4 331 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CERS6Q6ZMG9 384 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 TRIM74Q86UV6 250 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 GATAD2AQ86YP4 633 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CCNJLQ8IV13 435 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 RBFAQ8N0V3 343 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 NXPE1Q8N323 547 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 OR4L1Q8NH43 312 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 OR4C6Q8NH72 309 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 GPBAR1Q8TDU6 330 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 RHBDD1Q8TEB9 315 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 LRRC39Q96DD0 335 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 SIGLEC10Q96LC7 697 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 ZNF778Q96MU6 729 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 OR2M4Q96R27 311 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 GSDMCQ9BYG8 508 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 TRIM31Q9BZY9 425 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 OR2AG1Q9H205 316 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 TCEAL2Q9H3H9 227 aaPredicted RBP16.76■□□□□ 0.27
USP39-211ENST00000465282 NCKIPSDQ9NZQ3 722 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 ZNHIT2Q9UHR6 403 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 CRLS1Q9UJA2 301 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 PCOLCE2Q9UKZ9 415 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
USP39-211ENST00000465282 ARHGEF17Q96PE2 2063 aaPredicted RBP16.75■□□□□ 0.27
USP39-211ENST00000465282 CCDC162PA2VCL2 907 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 KLHL33A6NCF5 533 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ESPNB1AK53 854 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 CFAP99D6REC4 459 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 KMOO15229 486 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 GRID2O43424 1007 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 SH3BP5O60239 455 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 KCNJ13O60928 360 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ANXA6P08133 673 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 CEACAM1P13688 526 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ZNF8P17098 575 aaPredicted RBP16.75■□□□□ 0.27
USP39-211ENST00000465282 MSH3P20585 1137 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 GNPDA1P46926 289 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ARSDP51689 593 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ILF3Q12906 894 aaKnown RBP eCLIP16.75■□□□□ 0.27
USP39-211ENST00000465282 HIF1AQ16665 826 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ZRANB3Q5FWF4 1079 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 AARS2Q5JTZ9 985 aaKnown RBP16.75■□□□□ 0.27
USP39-211ENST00000465282 TMEM135Q86UB9 458 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 FAM181AQ8N9Y4 354 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 OR6P1Q8NGX9 317 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 DCUN1D1Q96GG9 259 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 COPS8Q99627 209 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 CLPBQ9H078 707 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 TMEM168Q9H0V1 697 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
USP39-211ENST00000465282 EVA1BQ9NVM1 165 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 UCKL1Q9NWZ5 548 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 ZDHHC3Q9NYG2 299 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 SLC2A6Q9UGQ3 507 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 DOLKQ9UPQ8 538 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 GPSM3Q9Y4H4 160 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 DNMT3AQ9Y6K1 912 aaPredicted RBP16.75■□□□□ 0.27
USP39-211ENST00000465282 SPTBN4Q9H254 2564 aa16.75■□□□□ 0.27
USP39-211ENST00000465282 PIKFYVEQ9Y2I7 2098 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 IGLV3-16A0A075B6K0 115 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 CCDC78A2IDD5 438 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 TP73O15350 636 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 YY2O15391 372 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 USP1O94782 785 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 TTC4O95801 387 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 POLBP06746 335 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 GIMD1P0DJR0 217 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 ACRV1P26436 265 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 NMBRP28336 390 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 AKT1P31749 480 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 FOXN2P32314 431 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 CLCNKAP51800 687 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 ARL4CP56559 192 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 ITIH4Q14624 930 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 FASTKD1Q53R41 847 aaKnown RBP16.74■□□□□ 0.27
USP39-211ENST00000465282 KCTD16Q68DU8 428 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 KIAA0930Q6ICG6 404 aaPredicted RBP16.74■□□□□ 0.27
USP39-211ENST00000465282 ZCCHC8Q6NZY4 707 aaKnown RBP16.74■□□□□ 0.27
USP39-211ENST00000465282 GLRX5Q86SX6 157 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 LRRTM4Q86VH4 590 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 SERPINA9Q86WD7 417 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 MPP5Q8N3R9 675 aa16.74■□□□□ 0.27
USP39-211ENST00000465282 EID2Q8N6I1 236 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms