RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 BNC1Q01954 994 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 EPS8Q12929 822 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 CLCA4Q14CN2 919 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 AGERQ15109 404 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 BCL7AQ4VC05 210 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SPANXN3Q5MJ09 141 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SYT6Q5T7P8 510 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 DENND1BQ6P3S1 775 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FAM196AQ6ZSG2 479 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 IFNEQ86WN2 208 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FUNDC1Q8IVP5 155 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 NPLOC4Q8TAT6 608 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SLC2A14Q8TDB8 520 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TMBIM1Q969X1 311 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TMEM80Q96HE8 168 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 RNF145Q96MT1 663 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 TWNKQ96RR1 684 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 MBOAT4Q96T53 435 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 AGAP2Q99490 1192 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TEX13BQ9BXU2 312 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 CEP41Q9BYV8 373 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ROGDIQ9GZN7 287 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 NTN4Q9HB63 628 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 RANGRFQ9HD47 186 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 TRMT13Q9NUP7 481 aaKnown RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 POLR3BQ9NW08 1133 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 COQ3Q9NZJ6 369 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SEPT10Q9P0V9 454 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 GABBR1Q9UBS5 961 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ANKRD6Q9Y2G4 727 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 MAGED1Q9Y5V3 778 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 H3BMM5 538 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FXYD1O00168 92 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 ANGPT2O15123 496 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TREHO43280 583 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 XPNPEP2O43895 674 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PCNAP12004 261 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 HNRNPLP14866 589 aaKnown RBP eCLIP8.56□□□□□ -1.04
LSM5-208ENST00000450169 CLK1P49759 484 aaKnown RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 YWHAEP62258 255 aaKnown RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 NFIXQ14938 502 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PSMD5Q16401 504 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 LRRC26Q2I0M4 334 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SPATS1Q496A3 300 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 GPAT3Q53EU6 434 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ARHGEF16Q5VV41 709 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 CNSTQ6PJW8 725 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PIWIL4Q7Z3Z4 852 aaKnown RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 XYLT1Q86Y38 959 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 RAB43Q86YS6 212 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FSTL5Q8N475 847 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ACVR1CQ8NER5 493 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 DNERQ8NFT8 737 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 PCDH19Q8TAB3 1148 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ZFAND1Q8TCF1 268 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 BPIFB1Q8TDL5 484 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 MCRS1Q96EZ8 462 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 FEM1AQ9BSK4 669 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 C1QTNF1Q9BXJ1 281 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 TRIM8Q9BZR9 551 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 AMBRA1Q9C0C7 1298 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 DPEP3Q9H4B8 488 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 LRRC4Q9HBW1 653 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 ZBTB20Q9HC78 741 aaPredicted RBP8.56□□□□□ -1.04
LSM5-208ENST00000450169 ENTPD7Q9NQZ7 604 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 XPR1Q9UBH6 696 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 CYTH4Q9UIA0 394 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 SLC39A10Q9ULF5 831 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 STAP1Q9ULZ2 295 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 NDUFAF1Q9Y375 327 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 IPPQ9Y573 584 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 A3GALT2U3KPV4 340 aa8.56□□□□□ -1.04
LSM5-208ENST00000450169 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 TARM1B6A8C7 271 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 UPK1AO00322 258 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ARHGEF9O43307 516 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 CNTN5O94779 1100 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ITGA2P17301 1181 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 YWHAQP27348 245 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ATICP31939 592 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 IL12RB1P42701 662 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 SLC15A1P46059 708 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 PRIM2P49643 509 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GSK3BP49841 420 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 GTF2A2P52657 109 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 ISL1P61371 349 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 YBX1P67809 324 aaKnown RBP8.55□□□□□ -1.04
LSM5-208ENST00000450169 GHRHRQ02643 423 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 FADDQ13158 208 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 VPS26BQ4G0F5 336 aa8.55□□□□□ -1.04
LSM5-208ENST00000450169 RAB6CQ53S08 254 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms