RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CPZQ66K79 652 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 PPP1R3BQ86XI6 285 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 Q8NA96 180 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 ELMO2Q96JJ3 720 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 FCRL4Q96PJ5 515 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 RUFY1Q96T51 708 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 SLC25A23Q9BV35 468 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 EPHA6Q9UF33 1036 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 LNPEPQ9UIQ6 1025 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 DNPEPQ9ULA0 475 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 ADGRG4Q8IZF6 3080 aa14.19□□□□□ -0.14
HMGN1-208ENST00000443046 H3BRJ5 948 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CHUKO15111 745 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 RNF8O76064 485 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 LDLRP01130 860 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 NELFEP18615 380 aaKnown RBP14.18□□□□□ -0.14
HMGN1-208ENST00000443046 IL1R2P27930 398 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 PTPN4P29074 926 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CAPZBP47756 277 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 SPINT3P49223 89 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 MRPL49Q13405 166 aaKnown RBP14.18□□□□□ -0.14
HMGN1-208ENST00000443046 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 TMCO3Q6UWJ1 677 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 PHYKPLQ8IUZ5 450 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 ATPAF2Q8N5M1 289 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 ENOX1Q8TC92 643 aaKnown RBP14.18□□□□□ -0.14
HMGN1-208ENST00000443046 TCTN2Q96GX1 697 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CSPG4P5Q96PW8 444 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 TDRD1Q9BXT4 1180 aaKnown RBP14.18□□□□□ -0.14
HMGN1-208ENST00000443046 RAB33BQ9H082 229 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 NT5MQ9NPB1 228 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CASS4Q9NQ75 786 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 KLC4Q9NSK0 619 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 ATXN10Q9UBB4 475 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 PCDHGB7Q9Y5F8 929 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 CSMD2Q7Z408 3487 aa14.18□□□□□ -0.14
HMGN1-208ENST00000443046 POLQO75417 2590 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 RGSL1A5PLK6 1076 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 GPR89AB7ZAQ6 455 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 VIPP01282 170 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 GPR89BP0CG08 455 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 BRAFP15056 766 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 ZNF8P17098 575 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 CES1P23141 567 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 PCK1P35558 622 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 RPL26P61254 145 aaKnown RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 IL10RAQ13651 578 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 PRR30Q53SZ7 412 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 CACHD1Q5VU97 1274 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 PWWP2BQ6NUJ5 590 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 JMJD6Q6NYC1 403 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 ZNF517Q6ZMY9 492 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 IRF2BP2Q7Z5L9 587 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 SYVN1Q86TM6 617 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 NEK11Q8NG66 645 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 NSMCE1Q8WV22 266 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 RSC1A1Q92681 617 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 SLC41A2Q96JW4 573 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 POLR1EQ9GZS1 481 aaKnown RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 ING2Q9H160 280 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 SLC23A2Q9UGH3 650 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 ERRFI1Q9UJM3 462 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
HMGN1-208ENST00000443046 CHKBQ9Y259 395 aa14.17□□□□□ -0.14
HMGN1-208ENST00000443046 PDZD2O15018 2839 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 TACC2O95359 2948 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 POLEQ07864 2286 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 RASSF9O75901 435 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 TCF4P15884 667 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 AMD1P17707 334 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 LPOP22079 712 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ARL4AP40617 200 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 CCL11P51671 97 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 EPHB1P54762 984 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 RPS18P62269 152 aaKnown RBP14.16□□□□□ -0.14
HMGN1-208ENST00000443046 CHAF1BQ13112 559 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 BOLA3Q53S33 107 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 CYB5D1Q6P9G0 228 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 FAM199XQ6PEV8 388 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ABRAXAS1Q6UWZ7 409 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 BPHLQ86WA6 291 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-208ENST00000443046 LRRC49Q8IUZ0 686 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ARRDC2Q8TBH0 407 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ADAMTS17Q8TE56 1095 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 MAML1Q92585 1016 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 EID2BQ96D98 161 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ZDHHC12Q96GR4 267 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 TRIM39Q9HCM9 518 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 PDE7BQ9NP56 450 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 ZNF451Q9Y4E5 1061 aa14.16□□□□□ -0.14
HMGN1-208ENST00000443046 FOLR1P15328 257 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 FERP16591 822 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 VARSP26640 1264 aaKnown RBP14.15□□□□□ -0.14
HMGN1-208ENST00000443046 DSC2Q02487 901 aa14.15□□□□□ -0.14
HMGN1-208ENST00000443046 BECN1Q14457 450 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms