RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 JOSD2Q8TAC2 188 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 LRRC4CQ9HCJ2 640 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 INTS10Q9NVR2 710 aaKnown RBP15.76■□□□□ 0.11
PTPN13-204ENST00000436978 AVPR1BP47901 424 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 SLC25A3Q00325 362 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 ZNF730Q6ZMV8 503 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 S100ZQ8WXG8 99 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 WRAP53Q9BUR4 548 aaKnown RBP15.76■□□□□ 0.11
PTPN13-204ENST00000436978 FBXW11Q9UKB1 542 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 SNX7Q9UNH6 387 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 UBXN7O94888 489 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 C9orf64Q5T6V5 341 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 RNASEH2BQ5TBB1 312 aaKnown RBP15.76■□□□□ 0.11
PTPN13-204ENST00000436978 BEND5Q7L4P6 421 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 TRABD2AQ86V40 505 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 BRSK1Q8TDC3 778 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 ADAMTS15Q8TE58 950 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 C12orf42Q96LP6 360 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 TMCC2O75069 709 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 RTL4Q6ZR62 310 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 PIH1D2Q8WWB5 315 aa15.76■□□□□ 0.11
PTPN13-204ENST00000436978 RHPN2P1A8MT19 583 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 GNSP15586 552 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 TSPAN8P19075 237 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ZNF132P52740 706 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 INAVAQ3KP66 663 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 LIN54Q6MZP7 749 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 UNC5BQ8IZJ1 945 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 DQX1Q8TE96 717 aaKnown RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 CLEC4DQ8WXI8 215 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 HEPHQ9BQS7 1158 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 RIPK3Q9Y572 518 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 CCDC182A6NF36 153 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 TRIM32Q13049 653 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 MSANTD2Q6P1R3 559 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 TOR4AQ9NXH8 423 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ADGRE2Q9UHX3 823 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 UBE2QL1A1L167 161 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 RFC2P35250 354 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ARFIP1P53367 373 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 SP2Q02086 613 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 PPIDQ08752 370 aaKnown RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 TBC1D25Q3MII6 688 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ZNF155Q12901 538 aaPredicted RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 SPESP1Q6UW49 350 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 SLC9A7Q96T83 725 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 FAM83DQ9H4H8 585 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 COMMD9Q9P000 198 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ITPKAP23677 461 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 DGCR6Q14129 220 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 CPSF7Q8N684 471 aaKnown RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 MCMBPQ9BTE3 642 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 SASH3O75995 380 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ANPEPP15144 967 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 NSG1P42857 185 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 KIR3DL1P43629 444 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ATP1A4Q13733 1029 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 FOXR1Q6PIV2 292 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 OTOP3Q7RTS5 596 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 MPP5Q8N3R9 675 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 LRRN4CLQ8ND94 238 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 HERVK_113Q902F9 699 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 RBM4BQ9BQ04 359 aaKnown RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 RBM4Q9BWF3 364 aaKnown RBP15.75■□□□□ 0.11
PTPN13-204ENST00000436978 ELOVL2Q9NXB9 296 aa15.75■□□□□ 0.11
PTPN13-204ENST00000436978 AAGABQ6PD74 315 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 TRPV3Q8NET8 790 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 PAIP1Q9H074 479 aaKnown RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 C11orf49Q9H6J7 331 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 ELL3Q9HB65 397 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 TMEM27Q9HBJ8 222 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 IRAK3Q9Y616 596 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 DHX15O43143 795 aaKnown RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 MATN4O95460 622 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 GIMD1P0DJR0 217 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 ITPKBP27987 946 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 RPIAP49247 311 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 ILF3Q12906 894 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 RCN3Q96D15 328 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 MYOCQ99972 504 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 GRIP2Q9C0E4 1043 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 LRRC37A3O60309 1634 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 NRP2O60462 931 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 LRCH4O75427 683 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 VARSP26640 1264 aaKnown RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 CRELD2Q6UXH1 353 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 TMPRSS11AQ6ZMR5 421 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 BRINP2Q9C0B6 783 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 EPB41L1Q9H4G0 881 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 CAB39LQ9H9S4 337 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 ADSLP30566 484 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-204ENST00000436978 OMPP47874 163 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 TAF5Q15542 800 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 TWIST2Q8WVJ9 160 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 CALML5Q9NZT1 146 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 PSMD13Q9UNM6 376 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 HOXC12P31275 282 aa15.74■□□□□ 0.11
PTPN13-204ENST00000436978 RHAGQ02094 409 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms