RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GRIK2Q13002 908 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 RBBP7Q16576 425 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 SPATS1Q496A3 300 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 SLC39A5Q6ZMH5 540 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 ARL14EPQ8N8R7 260 aaPredicted RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 ACDQ96AP0 544 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 KLHL32Q96NJ5 620 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 SMIM14Q96QK8 99 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TRIM15Q9C019 465 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 P2RY12Q9H244 342 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 MRPL17Q9NRX2 175 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 RIC8BQ9NVN3 520 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
THBS3-202ENST00000428962 CD300AQ9UGN4 299 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 RAB26Q9ULW5 256 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 ASB3Q9Y575 518 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 CPQQ9Y646 472 aa13.57□□□□□ -0.24
THBS3-202ENST00000428962 KIAA0100Q14667 2235 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 CAPN8A6NHC0 703 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 PPP6CO00743 305 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 TXNDC9O14530 226 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 RNASEH1O60930 286 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 SOCS5O75159 536 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 LINC00032P0C843 101 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 PIM1P11309 404 aaPredicted RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 HDCP19113 662 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
THBS3-202ENST00000428962 PAX7P23759 505 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 GJA8P48165 433 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 RHDQ02161 417 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 FOXM1Q08050 763 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 ATXN7L2Q5T6C5 722 aaPredicted RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 IRAK1BP1Q5VVH5 260 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 LYPLAL1Q5VWZ2 237 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 GPRIN3Q6ZVF9 776 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 LYSMD3Q7Z3D4 306 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 ADAMTSL2Q86TH1 951 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 FUNDC1Q8IVP5 155 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 FAM156AQ8NDB6 213 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 ZNF689Q96CS4 500 aaPredicted RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 ALG14Q96F25 216 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 PDLIM5Q96HC4 596 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 GBP5Q96PP8 586 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 SLC30A3Q99726 388 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 CLPBQ9H078 707 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 CNOT11Q9UKZ1 510 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 SUFUQ9UMX1 484 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 BTRCQ9Y297 605 aa13.56□□□□□ -0.24
THBS3-202ENST00000428962 TNPO3Q9Y5L0 923 aaKnown RBP13.56□□□□□ -0.24
THBS3-202ENST00000428962 ABHD14A-ACY1A0A1B0GW23 586 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 DENRO43583 198 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 GREM1O60565 184 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PRR35P0CG20 571 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 ITGALP20701 1170 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CSNK1DP48730 415 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CLCN2P51788 898 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CLCN7P51798 805 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 SLC7A2P52569 658 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ATXN3P54252 364 aaPredicted RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 FOLH1Q04609 750 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 BCL2L1Q07817 233 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 RALGDSQ12967 914 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GRB7Q14451 532 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PDK3Q15120 406 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 LAYNQ6UX15 382 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 SYVN1Q86TM6 617 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 RBFAQ8N0V3 343 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 CHCHD4Q8N4Q1 142 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 MINDY1Q8N5J2 469 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ZNF382Q96SR6 550 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PKP2Q99959 881 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 ZNF334Q9HCZ1 680 aaPredicted RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 SARS2Q9NP81 518 aaKnown RBP13.55□□□□□ -0.24
THBS3-202ENST00000428962 TMEM45AQ9NWC5 275 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 APPL1Q9UKG1 709 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 DHRS7Q9Y394 339 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 AP4S1Q9Y587 144 aa13.55□□□□□ -0.24
THBS3-202ENST00000428962 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms