RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RAB33BQ9H082 229 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF768Q9H5H4 540 aaKnown RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RMND5AQ9H871 391 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 ECT2Q9H8V3 914 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GPN1Q9HCN4 374 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 IL1RAPL1Q9NZN1 696 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TRPM5Q9NZQ8 1165 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CRNNQ9UBG3 495 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 MALT1Q9UDY8 824 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 GMEB2Q9UKD1 530 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 TSPAN16Q9UKR8 245 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RIMKLBQ9ULI2 386 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 RCE1Q9Y256 329 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 CARD8Q9Y2G2 431 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 STK38LQ9Y2H1 464 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 UBE2J1Q9Y385 318 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-205ENST00000424674 MAB21L2Q9Y586 359 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 PCDHB2Q9Y5E7 798 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 COMMD3-BMI1R4GMX3 469 aa3.71□□□□□ -1.82
SF3B1-205ENST00000424674 LOC105369274A0A096LPK9 316 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 LOC102723532A0A0G2JNH3 316 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ELOVL7A1L3X0 281 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SDR42E2A6NKP2 422 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF879B4DU55 563 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 B5MCH6 92 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 LEFTY2O00292 366 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 NVLO15381 856 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HCRTR2O43614 444 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HSF2BPO75031 334 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PRDM1O75626 825 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 GALTP07902 379 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HSPA8P11142 646 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PKMP14618 531 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 NR1D1P20393 614 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 BMP5P22003 454 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ACP1P24666 158 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CD27P26842 260 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 RBL1P28749 1068 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 LRPAP1P30533 357 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 NF2P35240 595 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 THBS4P35443 961 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HNF1BP35680 557 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 TAGLN2P37802 199 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CAPGP40121 348 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 FRKP42685 505 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ACTR3P61158 418 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HSPA14Q0VDF9 509 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PDZK1IP1Q13113 114 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 OLIG2Q13516 323 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 KCNC3Q14003 757 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 IQCB1Q15051 598 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SNAPC1Q16533 368 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 IFI44LQ53G44 452 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 GLE1Q53GS7 698 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ARHGEF16Q5VV41 709 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ATG9BQ674R7 924 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 TSSK4Q6SA08 328 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PACS1Q6VY07 963 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PIK3AP1Q6ZUJ8 805 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 LRRC70Q7Z2Q7 622 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 DGLUCYQ7Z3D6 616 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF572Q7Z3I7 529 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 KRT27Q7Z3Y8 459 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CAND1Q86VP6 1230 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 COMTD1Q86VU5 262 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 WDR49Q8IV35 697 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SPARTQ8N0X7 666 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 OR4N4Q8N0Y3 316 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PLD5Q8N7P1 536 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 STEAP2Q8NFT2 490 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SLC35B2Q8TB61 432 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SLC26A7Q8TE54 656 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 OVCA2Q8WZ82 227 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PPP2R3CQ969Q6 453 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 NCLNQ969V3 563 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 MMABQ96EY8 250 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 MYEOVQ96EZ4 313 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 IFT74Q96LB3 600 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF558Q96NG5 402 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CATSPER2Q96P56 530 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HIST1H2AAQ96QV6 131 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 RIOK1Q9BRS2 568 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 NPLQ9BXD5 320 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CAPS2Q9BXY5 557 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 TEX101Q9BY14 249 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 OSBPL8Q9BZF1 889 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 GPR88Q9GZN0 384 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CLPBQ9H078 707 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PLK3Q9H4B4 646 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 EXO5Q9H790 373 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 RNPEPL1Q9HAU8 725 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HPS4Q9NQG7 708 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 KLC4Q9NSK0 619 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 FAM212BQ9NTI7 297 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 FBXO28Q9NVF7 368 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms