RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 BTN2A2Q8WVV5 523 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 BIRC8Q96P09 236 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 DHRS4Q9BTZ2 278 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 ZSCAN5AQ9BUG6 496 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PRMT8Q9NR22 394 aaPredicted RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PSMC3IPQ9P2W1 217 aaPredicted RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 RIMKLBQ9ULI2 386 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PI4KAP42356 2102 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 FAM95CA0A1B0GW59 222 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 H3BQF6 201 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 TRIM16O95361 564 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 IGLV3-19P01714 112 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PSMA3P25788 255 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 CDK3Q00526 305 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 IRF9Q00978 393 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 RASGEF1AQ8N9B8 481 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PEX13Q92968 403 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 COPS8Q99627 209 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 AASDHPPTQ9NRN7 309 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 EURLQ9NYK6 297 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 ATXN10Q9UBB4 475 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 TPP1O14773 563 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 SPAG7O75391 227 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
PRPF39-202ENST00000424478 TSHRP16473 764 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 ITPKAP23677 461 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 TAS2R39P59534 338 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 CCDC6Q16204 474 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 TYSND1Q2T9J0 566 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 GCNT7Q6ZNI0 430 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 OR13H1Q8NG92 308 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 CPNE1Q99829 537 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 ORAI3Q9BRQ5 295 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 WDR26Q9H7D7 661 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 NOVA2Q9UNW9 492 aaKnown RBP13.29□□□□□ -0.28
PRPF39-202ENST00000424478 MED16Q9Y2X0 877 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 CABIN1Q9Y6J0 2220 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 TRBV5-4A0A0C4DH59 114 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
PRPF39-202ENST00000424478 LEPRP48357 1165 aaKnown RBP13.29□□□□□ -0.28
PRPF39-202ENST00000424478 DCDC1P59894 354 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 TIAL1Q01085 375 aaKnown RBP eCLIP13.29□□□□□ -0.289e-7■■■■□ 23.8
PRPF39-202ENST00000424478 CREB5Q02930 508 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 SIDT2Q8NBJ9 832 aaKnown RBP13.29□□□□□ -0.28
PRPF39-202ENST00000424478 DNAJC16Q9Y2G8 782 aa13.29□□□□□ -0.28
PRPF39-202ENST00000424478 MEI4A8MW99 385 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 RGS16O15492 202 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF8P17098 575 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TMEM115Q12893 351 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 ANGPT1Q15389 498 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TRIM69Q86WT6 500 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 NRSN1Q8IZ57 195 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CALML6Q8TD86 181 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TSACCQ96A04 125 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 MCMBPQ9BTE3 642 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CDK14O94921 469 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 MYZAPP0CAP1 466 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CHRM3P20309 590 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 HNRNPA2B1P22626 353 aaKnown RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TTPAP49638 278 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 LIMK2P53671 638 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 USP10Q14694 798 aaKnown RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 SLC22A18ASQ8N1D0 253 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 MZB1Q8WU39 189 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 SPACA7Q96KW9 195 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 PCMTD2Q9NV79 361 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 ZDHHC3Q9NYG2 299 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 R4GN57 208 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 KRT87PA6NCN2 255 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 AGAP14A8MT82 685 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 SGTAO43765 313 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CDH16O75309 829 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 C7P10643 843 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 PYGBP11216 843 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 MSH3P20585 1137 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 OXTRP30559 389 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 DPTQ07507 201 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 PTRHD1Q6GMV3 140 aaKnown RBP13.28□□□□□ -0.28
PRPF39-202ENST00000424478 Q6ZSR6 202 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CYS1Q717R9 158 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 ADGRG6Q86SQ4 1221 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 TRAPPC5Q8IUR0 188 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 PHYKPLQ8IUZ5 450 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 GIMAP7Q8NHV1 300 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms