RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HSD11B1P28845 292 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 CELF3Q5SZQ8 465 aaKnown RBP18.37■□□□□ 0.53
SHANK3-202ENST00000414786 SLC9A4Q6AI14 798 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 APLFQ8IW19 511 aaPredicted RBP18.37■□□□□ 0.53
SHANK3-202ENST00000414786 SLC25A23Q9BV35 468 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 RFX7Q2KHR2 1363 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 TECPR2O15040 1411 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 ZNF878C9JN71 531 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 LARS2Q15031 903 aaKnown RBP18.37■□□□□ 0.53
SHANK3-202ENST00000414786 Q4G0T1 1027 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 TMEM86AQ8N2M4 240 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 CENPSQ8N2Z9 138 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 GIPC3Q8TF64 312 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 CD101Q93033 1021 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 IL22Q9GZX6 179 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 C9IYK1 514 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 KDELR1P24390 212 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 GJA9P57773 515 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 PEX6Q13608 980 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 HGSNATQ68CP4 663 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 OTOP3Q7RTS5 596 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 UNC5BQ8IZJ1 945 aa18.37■□□□□ 0.53
SHANK3-202ENST00000414786 OCLNQ16625 522 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 GXYLT1Q4G148 440 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 CAPN13Q6MZZ7 669 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 MFSD14AQ96MC6 490 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 HIF3AQ9Y2N7 669 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 C2orf71A6NGG8 1288 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 ATG13O75143 517 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 SNU13P55769 128 aaKnown RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 CORO7P57737 925 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 TAF10Q12962 218 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 DENND5AQ6IQ26 1287 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 SNRNP25Q9BV90 132 aaKnown RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 NXF3Q9H4D5 531 aaKnown RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 CCSER2Q9H7U1 834 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 KLRG2A4D1S0 409 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 ACKR2O00590 384 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 AZGP1P25311 298 aaKnown RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 TAS2R50P59544 299 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 RAB39AQ14964 217 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 TMPRSS6Q8IU80 811 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 E7EQ34 232 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 RPP14O95059 124 aaKnown RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 MLLT1Q03111 559 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-202ENST00000414786 PIGZQ86VD9 579 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 MID1O15344 667 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 MLYCDO95822 493 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 FAM153BP0C7A2 387 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 FAM153CQ494X1 144 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 ZDHHC17Q8IUH5 632 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 AUTS2Q8WXX7 1259 aa18.36■□□□□ 0.53
SHANK3-202ENST00000414786 AHCYL1O43865 530 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 KLHL26Q53HC5 615 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 CEP97Q8IW35 865 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 CTDNEP1O95476 244 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 OTCP00480 354 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ZNF20P17024 532 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 CAPGP40121 348 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 RARRES1P49788 294 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 C1QBPQ07021 282 aaKnown RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 C10orf107Q8IVU9 208 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 GPR151Q8TDV0 419 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ZFP37Q9Y6Q3 630 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 SLC35F4A4IF30 521 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 L7N2F9 121 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 FGF10O15520 208 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 MAGEA12P43365 314 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 VAMP2P63027 116 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PRKCDQ05655 676 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TIMM50Q3ZCQ8 353 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PIK3R3Q92569 461 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PPP3R2Q96LZ3 170 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 C12orf66Q96MD2 445 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TRAPPC9Q96Q05 1148 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 FKBP14Q9NWM8 211 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TAS2R14Q9NYV8 317 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PDP1Q9P0J1 537 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 SLC24A2Q9UI40 661 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 GLYATL1P3A0A0U1RQE8 302 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TGFB3P10600 412 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ALYREFQ86V81 257 aaKnown RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PIK3C3Q8NEB9 887 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TSTD1Q8NFU3 115 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 BORCS8Q96FH0 119 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TTYH2Q9BSA4 534 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 TTPALQ9BTX7 342 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PNPLA8Q9NP80 782 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 GNEQ9Y223 722 aaKnown RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 PAGE1O75459 146 aa18.35■□□□□ 0.53
SHANK3-202ENST00000414786 GATBO75879 557 aaKnown RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ILF3Q12906 894 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 ARL14EPQ8N8R7 260 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 NLGN4YQ8NFZ3 816 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-202ENST00000414786 SLC34A1Q06495 639 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms