RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ASIC2Q16515 512 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 ALG1LQ6GMV1 187 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 GALNT11Q8NCW6 608 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 ARRDC2Q8TBH0 407 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 CPT1CQ8TCG5 803 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 LRRN4Q8WUT4 740 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MAML1Q92585 1016 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 LYSMD1Q96S90 227 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 TRIM55Q9BYV6 548 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 PCDH9Q9HC56 1237 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MRPL47Q9HD33 250 aaKnown RBP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 RPL26L1Q9UNX3 145 aaKnown RBP14.35□□□□□ -0.11
VAMP1-203ENST00000400911 PCDHGA6Q9Y5G7 932 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
VAMP1-203ENST00000400911 RGSL1A5PLK6 1076 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 MFSD11O43934 449 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 RECKO95980 971 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CD48P09326 243 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 MYBL1P10243 752 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 FGF5P12034 268 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CASP14P31944 242 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 SEMA5AQ13591 1074 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 DNASE1L3Q13609 305 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 KRT81Q14533 505 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 QPCTQ16769 361 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 TDRD12Q587J7 1177 aaKnown RBP14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CRTC3Q6UUV7 619 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 FAM92BQ6ZTR7 304 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 APLFQ8IW19 511 aaPredicted RBP14.34□□□□□ -0.11
VAMP1-203ENST00000400911 TRIM48Q8IWZ4 208 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CCHCR1Q8TD31 782 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 CT55Q8WUE5 264 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 TEKT4Q8WW24 435 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 BTBD6Q96KE9 485 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 TRIM39Q9HCM9 518 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 LHX9Q9NQ69 397 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 DTLQ9NZJ0 730 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 PKD2L2Q9NZM6 624 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 DNAJC16Q9Y2G8 782 aa14.34□□□□□ -0.11
VAMP1-203ENST00000400911 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 ANKRD66B4E2M5 251 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 SEMA7AO75326 666 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 SLC25A14O95258 325 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 TIAF1O95411 115 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 CA4P22748 312 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 RPL10P27635 214 aaKnown RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 SLC25A11Q02978 314 aaKnown RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 GALNT2Q10471 571 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 PIGHQ14442 188 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 INSCQ1MX18 579 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 PLA2G4EQ3MJ16 856 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 NADK2Q4G0N4 442 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 ALS2CLQ60I27 953 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 E4F1Q66K89 784 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 PRSS42Q7Z5A4 293 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 ADGRG6Q86SQ4 1221 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 PPP1R3BQ86XI6 285 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 SSC4DQ8WTU2 575 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 KLHL6Q8WZ60 621 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 RSC1A1Q92681 617 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 EID2BQ96D98 161 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 TRIM11Q96F44 468 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 MLPHQ9BV36 600 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 SPATA16Q9BXB7 569 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 ACTL8Q9H568 366 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 AKIRIN1Q9H9L7 192 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
VAMP1-203ENST00000400911 RCOR3Q9P2K3 495 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-203ENST00000400911 OR52A4PA6NMU1 304 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 PDZK1P1A8MUH7 402 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 C21orf140B9A014 251 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 MTA2O94776 668 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 MT-ND3P03897 115 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 HLA-DQB2P05538 268 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 RNF224P0DH78 156 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 SKILP12757 684 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 CCNCP24863 283 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 CAPZBP47756 277 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 IFI16Q16666 785 aaKnown RBP14.32□□□□□ -0.12
VAMP1-203ENST00000400911 NCBP2-AS2Q69YL0 99 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 TIGD7Q6NT04 549 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-203ENST00000400911 PWWP2BQ6NUJ5 590 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 IRGCQ6NXR0 463 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 FAM199XQ6PEV8 388 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-203ENST00000400911 ZDHHC12Q96GR4 267 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 ISCUQ9H1K1 167 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 SLC40A1Q9NP59 571 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 ANO10Q9NW15 660 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 AMACRQ9UHK6 382 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 UNC79Q9P2D8 2635 aa14.32□□□□□ -0.12
VAMP1-203ENST00000400911 A1L4Q6 167 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms