RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 EPB41L4BQ9H329 900 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 TRIM39Q9HCM9 518 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 SMYD2Q9NRG4 433 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 RABGEF1Q9UJ41 708 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 FBXO5Q9UKT4 447 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 SMG5Q9UPR3 1016 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 TMEM98Q9Y2Y6 226 aa23.36■■□□□ 1.33
TSPAN4-203ENST00000397397 CXorf49A8MYA2 514 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 PFDN6O15212 129 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 PIAS1O75925 651 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 F7P08709 466 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 MSH3P20585 1137 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 KELP23276 732 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 HTR1BP28222 390 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 CSNK1EP49674 416 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 MPP1Q00013 466 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 OVGP1Q12889 678 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 PTK2BQ14289 1009 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 ITIH4Q14624 930 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 TYSND1Q2T9J0 566 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 KBTBD12Q3ZCT8 623 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 KHDC1Q4VXA5 237 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 TPRG1LQ5T0D9 272 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 PEAR1Q5VY43 1037 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 CTAGE3PQ8IX95 158 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 C2CD4AQ8NCU7 369 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 SKA1Q96BD8 255 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 DCUN1D1Q96GG9 259 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 WDR92Q96MX6 357 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 FUT8Q9BYC5 575 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 OR2AG1Q9H205 316 aa23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 FBXO6Q9NRD1 293 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-203ENST00000397397 VPS13AQ96RL7 3174 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 CFAP99D6REC4 459 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 TLR4O00206 839 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 GFRA3O60609 400 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 MAGEC1O60732 1142 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 EPN2O95208 641 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 C1QAP02745 245 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 RALBP11234 206 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 HSD17B3P37058 310 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 C21orf59P57076 290 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 TMEM115Q12893 351 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 SLC29A2Q14542 456 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 EFTUD2Q15029 972 aaKnown RBP eCLIP23.34■■□□□ 1.332e-6■■■□□ 19.1
TSPAN4-203ENST00000397397 UAP1Q16222 522 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 RNF187Q5TA31 235 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 ADGRG6Q86SQ4 1221 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 DCP2Q8IU60 420 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 SLC22A18ASQ8N1D0 253 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 HEXDCQ8WVB3 486 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 SCG3Q8WXD2 468 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 CCDC97Q96F63 343 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 CYTH2Q99418 400 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 BOCQ9BWV1 1114 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 ZCCHC2Q9C0B9 1178 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 ACSS3Q9H6R3 686 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 GPR27Q9NS67 375 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 ATXN10Q9UBB4 475 aa23.34■■□□□ 1.33
TSPAN4-203ENST00000397397 IGLV3-16A0A075B6K0 115 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 UQCRHLA0A096LP55 91 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 TMEM202A6NGA9 273 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 VILLO15195 856 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 OR1I1O60431 355 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 S1PR4O95977 384 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 UQCRHP07919 91 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 HOXD12P35452 270 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 POLD2P49005 469 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 B4GALNT1Q00973 533 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 GTF2H3Q13889 308 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 ENPP7Q6UWV6 458 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 MACC1Q6ZN28 852 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 KIAA0408Q6ZU52 694 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 RBFAQ8N0V3 343 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 PPM1NQ8N819 430 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 INTS10Q9NVR2 710 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 NSMCE4AQ9NXX6 385 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 VPS9D1Q9Y2B5 631 aa23.33■■□□□ 1.33
TSPAN4-203ENST00000397397 USP34Q70CQ2 3546 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 UBA6A0AVT1 1052 aaPredicted RBP23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 VEGFDO43915 354 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 CDK14O94921 469 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNF7P17097 686 aaPredicted RBP23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 NAB1Q13506 487 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNF789Q5FWF6 425 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 LAIR1Q6GTX8 287 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 DET1Q7L5Y6 550 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 RABEPKQ7Z6M1 372 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 SLC26A11Q86WA9 606 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 MREGQ8N565 214 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 OR56A4Q8NGH8 313 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 VPS18Q9P253 973 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 MOSPD1Q9UJG1 213 aa23.33■■□□□ 1.32
TSPAN4-203ENST00000397397 SPTY2D1-AS1A0A0U1RR47 76 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 A0A1B0GVT2 93 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 CEACAM5P06731 702 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 ATP1B2P14415 290 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNF8P17098 575 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 NSG1P42857 185 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 LEPRP48357 1165 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms