RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 AK4P27144 223 aaPredicted RBP14.42□□□□□ -0.1
SEC13-208ENST00000397109 ACTR1BP42025 376 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 CHRNA4P43681 627 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 ACTR1AP61163 376 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 VSNL1P62760 191 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 DRICH1Q6PGQ1 229 aaPredicted RBP14.42□□□□□ -0.1
SEC13-208ENST00000397109 SLC30A9Q6PML9 568 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 C17orf82Q86X59 251 aaPredicted RBP14.42□□□□□ -0.1
SEC13-208ENST00000397109 PHYKPLQ8IUZ5 450 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 TTC30BQ8N4P2 665 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 DTX3LQ8TDB6 740 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 GLYATL1Q969I3 302 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 VIPAS39Q9H9C1 493 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 TRIM39Q9HCM9 518 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 LRIT1Q9P2V4 623 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 R3HDM2Q9Y2K5 976 aaKnown RBP14.42□□□□□ -0.1
SEC13-208ENST00000397109 TMX2-CTNND1H3BSU7 103 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 MAP2K7O14733 419 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 AURKAO14965 403 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 USP12O75317 370 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 PSMB4P28070 264 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 CCL7P80098 99 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 GPS2Q13227 327 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 BIRC2Q13490 618 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 CCNG2Q16589 344 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 RANBP10Q6VN20 620 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 GLT6D1Q7Z4J2 308 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 CCNJLQ8IV13 435 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 CCDC110Q8TBZ0 833 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 BLOC1S5Q8TDH9 187 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 PKNOX2Q96KN3 472 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 VPS35Q96QK1 796 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 GFM1Q96RP9 751 aaKnown RBP14.41□□□□□ -0.1
SEC13-208ENST00000397109 FICDQ9BVA6 458 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 LRRN3Q9H3W5 708 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 SYNDIG1Q9H7V2 258 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 BPIFA1Q9NP55 256 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 HOMER3Q9NSC5 361 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 IL17CQ9P0M4 197 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
SEC13-208ENST00000397109 RABGEF1Q9UJ41 708 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 PKP3Q9Y446 797 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 PCDHB1Q9Y5F3 818 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 RNF215Q9Y6U7 377 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 ZFC3H1O60293 1989 aaKnown RBP14.41□□□□□ -0.1
SEC13-208ENST00000397109 DMXL2Q8TDJ6 3036 aa14.41□□□□□ -0.1
SEC13-208ENST00000397109 C2orf81A6NN90 581 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 RHPN2P1A8MT19 583 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 GRID2O43424 1007 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 VEGFDO43915 354 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 NUAK1O60285 661 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ECEL1O95672 775 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 AGTP01019 485 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ADRA1AP35348 466 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 SPAM1P38567 509 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 LSSP48449 732 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
SEC13-208ENST00000397109 CYP1B1Q16678 543 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 PARP6Q2NL67 630 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ARHGEF18Q6ZSZ5 1173 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ARL14Q8N4G2 192 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 GORASP1Q9BQQ3 440 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 FUT8Q9BYC5 575 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 POLR1BQ9H9Y6 1135 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ATXN10Q9UBB4 475 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ENTPD2Q9Y5L3 495 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
SEC13-208ENST00000397109 ASPMQ8IZT6 3477 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 STX7O15400 261 aaKnown RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 PSMD3O43242 534 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 LIASO43766 372 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 RPLP0P05388 317 aaKnown RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 SLC2A4P14672 509 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 ZNF8P17098 575 aaPredicted RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 STIP1P31948 543 aaKnown RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 ACTN2P35609 894 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 GPR3P46089 330 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 MAZP56270 477 aaKnown RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 PDE1BQ01064 536 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 CUL1Q13616 776 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 TAF1AQ15573 450 aaPredicted RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 CHST15Q7LFX5 561 aaPredicted RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 ZNF438Q7Z4V0 828 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 SPRED1Q7Z699 444 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 ADGRG6Q86SQ4 1221 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 KLHDC8BQ8IXV7 354 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 NAGSQ8N159 534 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 PRELID2Q8N945 189 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 Q8N9G6 341 aaPredicted RBP14.39□□□□□ -0.11
SEC13-208ENST00000397109 FAM71DQ8N9W8 422 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 BRSK1Q8TDC3 778 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 TMEM74Q96NL1 305 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 KRT12Q99456 494 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 OR2AG1Q9H205 316 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms