RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SNAPC1Q16533 368 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 LETM2Q2VYF4 491 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 FAM98BQ52LJ0 330 aaKnown RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 NSUN5P2Q63ZY6 315 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 FAM122CQ6P4D5 195 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCNI2Q6ZMN8 369 aaPredicted RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 CHST3Q7LGC8 479 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 RASGEF1CQ8N431 466 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 PRR26Q8N8Z3 221 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 TDRD5Q8NAT2 981 aaKnown RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 OR6J1Q8NGC5 347 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 UTP15Q8TED0 518 aaKnown RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 ADAMTS14Q8WXS8 1223 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 VPS33AQ96AX1 596 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 SMC6Q96SB8 1091 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 PFDN4Q9NQP4 134 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 LARSQ9P2J5 1176 aaKnown RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 DDX25Q9UHL0 483 aaKnown RBP5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 TSPYL4Q9UJ04 414 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 KLHL20Q9Y2M5 609 aa5.36□□□□□ -1.55
RNU6-40P-201ENST00000384254 A0A0U1RQJ8 604 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 A8MXE2 369 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 PLPP2O43688 288 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 PSMD10O75832 226 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 HOXC6P09630 235 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 SRCP12931 536 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 PCYT1AP49585 367 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ZNF81P51508 661 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 RAD23AP54725 363 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CSE1LP55060 971 aaKnown RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ABATP80404 500 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 IL11RAQ14626 422 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 MVPQ14764 893 aaKnown RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CALCRLQ16602 461 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCDC142Q17RM4 750 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ARMC3Q5W041 872 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 C11orf87Q6NUJ2 197 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 PLPPR4Q7Z2D5 763 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCDC186Q7Z3E2 898 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 IRF2BP2Q7Z5L9 587 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 TECPR1Q7Z6L1 1165 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 SLFN11Q7Z7L1 901 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 LDB1Q86U70 411 aaPredicted RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 FOXRED2Q8IWF2 684 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 TTC30BQ8N4P2 665 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ZBTB8BQ8NAP8 495 aaPredicted RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 FAM216AQ8WUB2 273 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ERLEC1Q96DZ1 483 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 QRFPRQ96P65 431 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 MTERF1Q99551 399 aaKnown RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 CMKLR1Q99788 373 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 HGH1Q9BTY7 390 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 EBF3Q9H4W6 596 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 WDR26Q9H7D7 661 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ZCCHC17Q9NP64 241 aaKnown RBP5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 NOX4Q9NPH5 578 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 SH3GLB2Q9NR46 395 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 MCM9Q9NXL9 1143 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 STK26Q9P289 416 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 ANAPC5Q9UJX4 755 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 TTC3P53804 2025 aa5.35□□□□□ -1.55
RNU6-40P-201ENST00000384254 MYMKA6NI61 221 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 ANKRD28O15084 1053 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 NDUFS4O43181 175 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 TBX10O75333 385 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 HSPA4LO95757 839 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 HSP90AB1P08238 724 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCDC175P0C221 793 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 UGT1A1P22309 533 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 NR2F2P24468 414 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 APOBEC1P41238 236 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCR3P51677 355 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 PPP5CP53041 499 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 PDE1BQ01064 536 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 DDR1Q08345 913 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 Q0VFX4 171 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 CRY2Q49AN0 593 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 XKR9Q5GH70 373 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 C18orf63Q68DL7 685 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 PM20D2Q8IYS1 436 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 FBXO39Q8N4B4 442 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 OR2AK2Q8NG84 335 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 THAP6Q8TBB0 222 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 ASB5Q8WWX0 329 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 MRPL44Q9H9J2 332 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 TRMT1Q9NXH9 659 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 GDE1Q9NZC3 331 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 WBP11Q9Y2W2 641 aaKnown RBP5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 AMDHD2Q9Y303 409 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 CCL27Q9Y4X3 112 aa5.34□□□□□ -1.55
RNU6-40P-201ENST00000384254 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
RNU6-40P-201ENST00000384254 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
RNU6-40P-201ENST00000384254 RFPL2O75678 378 aa5.33□□□□□ -1.56
RNU6-40P-201ENST00000384254 TRUB2O95900 331 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms