RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CDH23Q9H251 3354 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 STX7O15400 261 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 NPHS1O60500 1241 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 ALPIP09923 528 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CD1DP15813 335 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 ZNF37AP17032 561 aaPredicted RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CD70P32970 193 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 ENTPD1P49961 510 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 XIAPP98170 497 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 LSM12Q3MHD2 195 aaKnown RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CCDC92Q53HC0 331 aaPredicted RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 LPGAT1Q92604 370 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 BADQ92934 168 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 BTBD9Q96Q07 612 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 C2orf49Q9BVC5 232 aaPredicted RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 SPATA7Q9P0W8 599 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 EVLQ9UI08 416 aaPredicted RBP14.17□□□□□ -0.14
CLCN4-201ENST00000380829 CDH22Q9UJ99 828 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 INSL6Q9Y581 213 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 AP4B1Q9Y6B7 739 aa14.17□□□□□ -0.14
CLCN4-201ENST00000380829 LOC100653049A0A140TA62 436 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 ARHGAP10A1A4S6 786 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 H3BMM5 538 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 OR1I1O60431 355 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 NDUFS3O75489 264 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 RFPL2O75678 378 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 KRT34O76011 436 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 SRP72O76094 671 aaKnown RBP14.16□□□□□ -0.14
CLCN4-201ENST00000380829 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 GLUD1P00367 558 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 RXRGP48443 463 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 C16orf72Q14CZ0 275 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 EML3Q32P44 896 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 KDM1BQ8NB78 822 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TMIGD2Q96BF3 282 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TCEAL4Q96EI5 215 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TNFRSF12AQ9NP84 129 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 INTS10Q9NVR2 710 aaKnown RBP14.16□□□□□ -0.14
CLCN4-201ENST00000380829 POMPQ9Y244 141 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 DENND4CQ5VZ89 1909 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TMEM247A6NEH6 219 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TPD52L2O43399 206 aaKnown RBP14.16□□□□□ -0.14
CLCN4-201ENST00000380829 FZD6O60353 706 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 CD1EP15812 388 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TSPAN8P19075 237 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 HALP42357 657 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 ZRANB3Q5FWF4 1079 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 C6orf52Q5T4I8 152 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 OGFRL1Q5TC84 451 aaPredicted RBP14.16□□□□□ -0.14
CLCN4-201ENST00000380829 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 Q6ZNX1 250 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TTC30BQ8N4P2 665 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 GIPC3Q8TF64 312 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 EID2BQ96D98 161 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 CNDP1Q96KN2 507 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
CLCN4-201ENST00000380829 C1orf21Q9H246 121 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TNKS2Q9H2K2 1166 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 TBCCD1Q9NVR7 557 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 MED16Q9Y2X0 877 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 AK5Q9Y6K8 562 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 CROCCQ5TZA2 2017 aa14.16□□□□□ -0.14
CLCN4-201ENST00000380829 FOXD2O60548 495 aaPredicted RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CCNT2O60583 730 aaKnown RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 TNFAIP8O95379 198 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CTNNB1P35222 781 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SLC26A3P40879 764 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SUOXP51687 545 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 COPAP53621 1224 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 APOFQ13790 326 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 OR4D1Q15615 310 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 PTPRNQ16849 979 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 MPPE1Q53F39 396 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 PPM1LQ5SGD2 360 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 TMEM198Q66K66 360 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 NXNQ6DKJ4 435 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 PAQR3Q6TCH7 311 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 LYSMD3Q7Z3D4 306 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SPRED2Q7Z698 418 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CPXM2Q8N436 756 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 PAF1Q8N7H5 531 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CCDC126Q96EE4 140 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 MYO19Q96H55 970 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 MARK4Q96L34 752 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 GALPQ9UBC7 116 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 STK39Q9UEW8 545 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CDYLQ9Y232 598 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 KANSL1LA0AUZ9 987 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 DENRO43583 198 aaKnown RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SERPINB7O75635 380 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SERPINB5P36952 375 aa14.15□□□□□ -0.14
CLCN4-201ENST00000380829 CTSOP43234 321 aaPredicted RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 SETMARQ53H47 684 aaPredicted RBP14.15□□□□□ -0.14
CLCN4-201ENST00000380829 ZNF362Q5T0B9 420 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms