RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 KCNF1Q9H3M0 494 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 UBP1Q9NZI7 540 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GPR160Q9UJ42 338 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PLOD2O00469 737 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 DFNA5O60443 496 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RTN2O75298 545 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SYNGR4O95473 234 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GSTT2P0CG29 244 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GSTT2BP0CG30 244 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RARGP13631 454 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ITIH1P19827 911 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SCNN1AP37088 669 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RPL5P46777 297 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GSSP48637 474 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 NR1H2P55055 460 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RPP30P78346 268 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RCAN2Q14206 197 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SGO1Q5FBB7 561 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 DHX40Q8IX18 779 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SIDT2Q8NBJ9 832 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PIK3C3Q8NEB9 887 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 OR4D6Q8NGJ1 314 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 CPB2Q96IY4 423 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 TMEM168Q9H0V1 697 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 DCAF16Q9NXF7 216 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF222Q9UK12 451 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 DUSP10Q9Y6W6 482 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SLCO1B7G3V0H7 640 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GLRA3O75311 464 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PLEKHA8P1O95397 391 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ALDOAP04075 364 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 POLBP06746 335 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 UMPSP11172 480 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 CMPK1P30085 196 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ERVK-8P63133 956 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ORC1Q13415 861 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 TYSND1Q2T9J0 566 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 AP5B1Q2VPB7 878 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 MZT2AQ6P582 158 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 UNC93AQ86WB7 457 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 OR8H3Q8N146 312 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 OR6C4Q8NGE1 309 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 NAT6Q93015 286 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 OTUB2Q96DC9 234 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SERINC1Q9NRX5 453 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PAK5Q9P286 719 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 KLQ9UEF7 1012 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 FBXW2Q9UKT8 454 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 OGDHLQ9ULD0 1010 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 A0A075B6Q4 140 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 C2orf71A6NGG8 1288 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PRSS44E7EML9 344 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 FGF10O15520 208 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 RECQL4O94761 1208 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 LDLRP01130 860 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 LYNP07948 512 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 CHAF1BQ13112 559 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 FAM98BQ52LJ0 330 aaKnown RBP8.59□□□□□ -1.03
SYNE1-206ENST00000367253 FAM180BQ6P0A1 224 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SLC9B2Q86UD5 537 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 REXO1L1PQ8IX06 675 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 LRRN4CLQ8ND94 238 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 UCN3Q969E3 161 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 SGK3Q96BR1 496 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 MAP3K3Q99759 626 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 PADI3Q9ULW8 664 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
SYNE1-206ENST00000367253 HAT1O14929 419 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 NADKO95544 446 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CFHP08603 1231 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CDK4P11802 303 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 H2AFXP16104 143 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CCNA2P20248 432 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ALDH4A1P30038 563 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 GNALP38405 381 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ACTR3P61158 418 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 MRPL49Q13405 166 aaKnown RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TCEAL6Q6IPX3 200 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 DENND1BQ6P3S1 775 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 CNSTQ6PJW8 725 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 DLG3Q92796 817 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 AGPAT1Q99943 283 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 C9orf16Q9BUW7 83 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SLITRK2Q9H156 845 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 USP54Q70EL1 1684 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM114B3SHH9 223 aa8.58□□□□□ -1.04
SYNE1-206ENST00000367253 BHMG1C9JSJ3 638 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-206ENST00000367253 SNAPC5O75971 98 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms