RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CD160O95971 181 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 CHN1P15882 459 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 TPH1P17752 444 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 HLA-DPA1P20036 260 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 CSKP41240 450 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 RXRGP48443 463 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SERPINH1P50454 418 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 MSLNQ13421 630 aaPredicted RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 IHHQ14623 411 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC1A5Q15758 541 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 PROX2Q3B8N5 592 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 CDCP2Q5VXM1 449 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 RETSATQ6NUM9 610 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 LEKR1Q6ZMV7 388 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 CCDC81Q6ZN84 652 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 EXD3Q8N9H8 876 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 PPHLN1Q8NEY8 458 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 MRRFQ96E11 262 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 LMLNQ96KR4 655 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 NUDCD1Q96RS6 583 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SMC6Q96SB8 1091 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 C2orf49Q9BVC5 232 aaPredicted RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC2A11Q9BYW1 496 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 TRABDQ9H4I3 376 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 ERVMER34-1Q9H9K5 563 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 VPS28Q9UK41 221 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 TCAF1Q9Y4C2 921 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 LRRK1Q38SD2 2015 aa11.21□□□□□ -0.62
CSNK1E-202ENST00000366216 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 TMEM120BA0PK00 339 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 INSIG1O15503 277 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 SUV39H1O43463 412 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 SNAP91O60641 907 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 PIAS1O75925 651 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 TMCC1O94876 653 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 MT-ND3P03897 115 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 FGF1P05230 155 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 CREB1P16220 341 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 HLA-FP30511 346 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 LSP1P33241 339 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 NXPH1P58417 271 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 NFKB2Q00653 900 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 CDK18Q07002 472 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 PCSK7Q16549 785 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 ZNF776Q68DI1 518 aaPredicted RBP11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 PDPK2PQ6A1A2 396 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 NCEH1Q6PIU2 408 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 TIFABQ6ZNK6 161 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 USP30Q70CQ3 517 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 ADIPOR2Q86V24 386 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 SPATS2Q86XZ4 545 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 OXR1Q8N573 874 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 WFDC5Q8TCV5 224 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 PEX13Q92968 403 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 MFSD3Q96ES6 412 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 IFT43Q96FT9 208 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 CPNE1Q99829 537 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 CCDC134Q9H6E4 229 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 CHRAC1Q9NRG0 131 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 STARD5Q9NSY2 213 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 INTS9Q9NV88 658 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 NSMCE4AQ9NXX6 385 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 VPS51Q9UID3 782 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 PLA2G4CQ9UP65 541 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 NCKAP1Q9Y2A7 1128 aa11.2□□□□□ -0.62
CSNK1E-202ENST00000366216 TRPM6Q9BX84 2022 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 A0A1W2PPM1 405 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 TLR4O00206 839 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 SIGLEC6O43699 453 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 TYROBPO43914 113 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 SIN3BO75182 1162 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CSO75390 466 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 NDST3O95803 873 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 MYF5P13349 255 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 PAMP19021 973 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 NMBRP28336 390 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 GP5P40197 560 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CHRNA4P43681 627 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 RGRP47804 291 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CSNK1DP48730 415 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 UBAP2LQ14157 1087 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 POU6F1Q14863 301 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 SIRPB2Q5JXA9 342 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 GRTP1Q5TC63 336 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 KIAA0930Q6ICG6 404 aaPredicted RBP11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 CES3Q6UWW8 571 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 PACS1Q6VY07 963 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 SH2D5Q6ZV89 423 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 NLRP9Q7RTR0 991 aa11.19□□□□□ -0.62
CSNK1E-202ENST00000366216 KIAA0907Q7Z7F0 614 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms