RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TJP1Q07157 1748 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 DHRS12A0PJE2 317 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 FPGTO14772 594 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 SNAI1O95863 264 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 LINC00032P0C843 101 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 KIR3DL1P43629 444 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 NOVP48745 357 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PRKAG1P54619 331 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PWP1Q13610 501 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 MTX3Q5HYI7 312 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 FBXW8Q8N3Y1 598 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 DNAJB14Q8TBM8 379 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 WDR60Q8WVS4 1066 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 NDRG1Q92597 394 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 LENG1Q96BZ8 264 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 MTERF3Q96E29 417 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 NMUR1Q9HB89 426 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CD248Q9HCU0 757 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 ITM2CQ9NQX7 267 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CALML5Q9NZT1 146 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 MTRRQ9UBK8 725 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 R3HDM2Q9Y2K5 976 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PIRO00625 290 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 TSPAN19P0C672 248 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SLC35G6P0C7Q6 338 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 GNAZP19086 355 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CCND3P30281 292 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CCR4P51679 360 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 GTF2H2Q13888 395 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DPYSQ14117 519 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DPY19L1Q2PZI1 675 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 INAVAQ3KP66 663 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ALFQ53S48 1182 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CCNYL2Q5T2Q4 361 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 FSTL4Q6MZW2 842 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 GTF2H2CQ6P1K8 395 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 FAM220AQ7Z4H9 259 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 UNC5BQ8IZJ1 945 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DCAKDQ8WVC6 231 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 TEPSINQ96N21 525 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 LMAN2LQ9H0V9 348 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CCNB1IP1Q9NPC3 277 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ZC4H2Q9NQZ6 224 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 GTF2A1LQ9UNN4 478 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 YIPF1Q9Y548 306 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 LRRC14BA6NHZ5 514 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 H0Y858 1186 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 EPOP01588 193 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 TRBC1P01850 177 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 NTRK1P04629 796 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ADH5P11766 374 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 HNRNPLP14866 589 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 EPHA3P29320 983 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SLC26A3P40879 764 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 POLR2JP52435 117 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PRR5P85299 388 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DLG1Q12959 904 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PAFAH1B3Q15102 231 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DSELQ8IZU8 1212 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SCAIQ8N9R8 606 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 OR7D4Q8NG98 312 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DENND1AQ8TEH3 1009 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 VMP1Q96GC9 406 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 GPR21Q99679 349 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ABCG4Q9H172 646 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CNTN6Q9UQ52 1028 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 BANF1O75531 89 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 RB1P06400 928 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SLC10A3P09131 477 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 VARSP26640 1264 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PSMB9P28065 219 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ABCG1P45844 678 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ACTR3P61158 418 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 MRPS22P82650 360 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CLCQ05315 142 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 DLG2Q15700 870 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 EOGTQ5NDL2 527 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CMC1Q7Z7K0 106 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SLC35B2Q8TB61 432 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ARNTL2Q8WYA1 636 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 MIPEPQ99797 713 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SERHL2Q9H4I8 314 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 RIBC2Q9H4K1 309 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 SERHLQ9NQF3 203 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 HPS4Q9NQG7 708 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ABCB8Q9NUT2 735 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 THUMPD1Q9NXG2 353 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 WNT9AO14904 365 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 CST1P01037 141 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 PCCBP05166 539 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 NUP62P37198 522 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 LARS2Q15031 903 aaKnown RBP4.82□□□□□ -1.64
SCN3A-202ENST00000360093 LDLRAD1Q5T700 205 aa4.82□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF697Q5TEC3 545 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms