RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 CLCNKAP51800 687 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SRP54P61011 504 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 TRIP13Q15645 432 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZNF805Q5CZA5 627 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PRSS36Q5K4E3 855 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 TIGD7Q6NT04 549 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZFAND4Q86XD8 727 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 TMC8Q8IU68 726 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PLXDC1Q8IUK5 500 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 RELL1Q8IUW5 271 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 BEND7Q8N7W2 519 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 GLIS1Q8NBF1 620 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 OR4E2Q8NGC2 313 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 CHTF18Q8WVB6 975 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 IRGQQ8WZA9 623 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 TM9SF4Q92544 642 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SLC7A6OSQ96CW6 309 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZNF778Q96MU6 729 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 EFHD1Q9BUP0 239 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 RIOK2Q9BVS4 552 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 STK33Q9BYT3 514 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 CLPBQ9H078 707 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 LZTFL1Q9NQ48 299 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 HRASLS2Q9NWW9 162 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 COMMD8Q9NX08 183 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 TEKT2Q9UIF3 430 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SNX12Q9UMY4 172 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZFC3H1O60293 1989 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 POM121BA6NF01 834 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 DDX3XO00571 662 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PMM2O15305 246 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 KCNN4O15554 427 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PRMT3O60678 531 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SRPRAP08240 638 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PFKLP17858 780 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 HLA-DPA1P20036 260 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 DGKAP23743 735 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 RFC1P35251 1148 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 HSPA9P38646 679 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 IRAK1P51617 712 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZNF132P52740 706 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PPP2CBP62714 309 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PPP2CAP67775 309 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PLGLB1Q02325 96 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 GCNT1Q02742 428 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 DDX39BQ13838 428 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 IHHQ14623 411 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ACBD5Q5T8D3 534 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 GUSBP11Q6P575 273 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 POLNQ7Z5Q5 900 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZDHHC17Q8IUH5 632 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 CFAP206Q8IYR0 622 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SUMF1Q8NBK3 374 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 EXD1Q8NHP7 514 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 FIBINQ8TAL6 211 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ELMO1Q92556 727 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SCAMP4Q969E2 229 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 WBP2Q969T9 261 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 CLDN23Q96B33 292 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 VWCEQ96DN2 955 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ZDHHC12Q96GR4 267 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 MS4A14Q96JA4 679 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 OR2M4Q96R27 311 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 NDC1Q9BTX1 674 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SLC25A23Q9BV35 468 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 BTBD2Q9BX70 525 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 MAGEH1Q9H213 219 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 HAUS4Q9H6D7 363 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 MRPL40Q9NQ50 206 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 ITM2CQ9NQX7 267 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 AGPAT4Q9NRZ5 378 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 UTP6Q9NYH9 597 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 IFT80Q9P2H3 777 aaPredicted RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 SUCOQ9UBS9 1254 aaKnown RBP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 AMFRQ9UKV5 643 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PADI1Q9ULC6 663 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 RAI2Q9Y5P3 530 aa3.76□□□□□ -1.81
SMC1B-201ENST00000357450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMC1B-201ENST00000357450 HEATR9A2RTY3 570 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 LRRC53A6NM62 1247 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 HOXC11O43248 304 aaPredicted RBP3.75□□□□□ -1.81
SMC1B-201ENST00000357450 DYRK3O43781 588 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 KIAA0754O94854 1291 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 NDUFA10O95299 355 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 VNN1O95497 513 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 CPNE6O95741 557 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 KLKB1P03952 638 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 RHOQP17081 205 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 POLR2CP19387 275 aaPredicted RBP3.75□□□□□ -1.81
SMC1B-201ENST00000357450 GCKP35557 465 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 ASPAP45381 313 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 POLD2P49005 469 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 ARG2P78540 354 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 BTKQ06187 659 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 ZNF844Q08AG5 666 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 DOC2BQ14184 412 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 LBRQ14739 615 aaKnown RBP3.75□□□□□ -1.81
SMC1B-201ENST00000357450 CASP8Q14790 479 aa3.75□□□□□ -1.81
SMC1B-201ENST00000357450 ATP13A4Q4VNC1 1196 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms