RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SLC22A1O15245 554 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 GYG2O15488 501 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RIPK2O43353 540 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 MED7O43513 233 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 FKBP6O75344 327 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 KRT75O95678 551 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 INHBBP09529 407 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RAB40ALP0C0E4 278 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ACADMP11310 421 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CASP1P29466 404 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 NOS2P35228 1153 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 GALCP54803 685 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CDH4P55283 916 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RNASE9P60153 205 aaKnown RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ACTR3P61158 418 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 DLG1Q12959 904 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 KRT81Q14533 505 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RPS6KA1Q15418 735 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 SNRNP35Q16560 246 aaKnown RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 TMEM95Q3KNT9 176 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 MMEL1Q495T6 779 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 C9orf64Q5T6V5 341 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 TXNDC8Q6A555 127 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CCBE1Q6UXH8 406 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 LRRC6Q86X45 466 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 GLIS1Q8NBF1 620 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF564Q8TBZ8 553 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 MCUR1Q96AQ8 359 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ALG14Q96F25 216 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CCDC138Q96M89 665 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 DHRS9Q9BPW9 319 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 MRPL1Q9BYD6 325 aaKnown RBP7.3□□□□□ -1.24
ZNF540-202ENST00000343599 TRIM9Q9C026 710 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 GAREM1Q9H706 876 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ABCB8Q9NUT2 735 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 ARMC1Q9NVT9 282 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 CLCA2Q9UQC9 943 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 B3GNT3Q9Y2A9 372 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 U3KQA8 63 aa7.3□□□□□ -1.24
ZNF540-202ENST00000343599 LINC00854A0A1B0GVQ3 168 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 H3BSA7 217 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 AP3B1O00203 1094 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KRIT1O00522 736 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KCNK3O14649 394 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TGFB1I1O43294 461 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ACSL4O60488 711 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CLDN11O75508 207 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 B3GALNT1O75752 331 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ITGB3P05106 788 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 GLDCP23378 1020 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PON1P27169 355 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ADSLP30566 484 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MCM7P33993 719 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CASRP41180 1078 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 IFITM2Q01629 132 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CDK18Q07002 472 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 INSCQ1MX18 579 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TIGD2Q4W5G0 525 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 C6orf132Q5T0Z8 1188 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 NDUFAF5Q5TEU4 345 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PDPK2PQ6A1A2 396 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 RPUSD3Q6P087 351 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CLVS1Q8IUQ0 354 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF683Q8IZ20 524 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CSGALNACT2Q8N6G5 542 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 NATD1Q8N6N6 113 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ARL14EPQ8N8R7 260 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TOE1Q96GM8 510 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF599Q96NL3 588 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TRIM56Q9BRZ2 755 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TUBGCP2Q9BSJ2 902 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 AP1M1Q9BXS5 423 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TRIM8Q9BZR9 551 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 RNF38Q9H0F5 515 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 IL17BQ9UHF5 180 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 OTOGLQ3ZCN5 2332 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 FAM187AA6NFU0 413 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 HYAL3O43820 417 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 FYNP06241 537 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PLCG1P19174 1290 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 FOLH1Q04609 750 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 GALNT1Q10472 559 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MS4A13Q5J8X5 152 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MIIPQ5JXC2 388 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TUBA3EQ6PEY2 450 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SPATC1Q76KD6 591 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 LYSMD3Q7Z3D4 306 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SCD5Q86SK9 330 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SPACA3Q8IXA5 215 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MIB2Q96AX9 1013 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 NSL1Q96IY1 281 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF641Q96N77 438 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SLC46A1Q96NT5 459 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 RANBP9Q96S59 729 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms