RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 BEND5Q7L4P6 421 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 PCDH20Q8N6Y1 951 aaKnown RBP12.53□□□□□ -0.4
DFFB-202ENST00000339350 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 AGAP4Q96P64 663 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 WACQ9BTA9 647 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 PCDHAC1Q9H158 963 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 SOX17Q9H6I2 414 aaPredicted RBP12.53□□□□□ -0.4
DFFB-202ENST00000339350 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 ZDHHC2Q9UIJ5 367 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
DFFB-202ENST00000339350 DLGAP1O14490 977 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 SOCS7O14512 581 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 ACOT8O14734 319 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 NOS1APO75052 506 aaPredicted RBP12.52□□□□□ -0.4
DFFB-202ENST00000339350 MT-CO1P00395 513 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 ALDH4A1P30038 563 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.4
DFFB-202ENST00000339350 NME5P56597 212 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 ADIGQ0VDE8 80 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 MERTKQ12866 999 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 CSTF3Q12996 717 aaKnown RBP12.52□□□□□ -0.4
DFFB-202ENST00000339350 POLD3Q15054 466 aaPredicted RBP12.52□□□□□ -0.4
DFFB-202ENST00000339350 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 ARL13AQ5H913 290 aaPredicted RBP12.52□□□□□ -0.4
DFFB-202ENST00000339350 KDELC2Q7Z4H8 507 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 RIOX2Q8IUF8 465 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 CBR4Q8N4T8 237 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 URGCPQ8TCY9 931 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 RBBP8Q99708 897 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 SPC25Q9HBM1 224 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 BRD7Q9NPI1 651 aa12.52□□□□□ -0.4
DFFB-202ENST00000339350 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 CTDSP2O14595 271 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 NDUFA2O43678 99 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 PI15O43692 258 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 TRIM13O60858 407 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 CPNE3O75131 537 aaKnown RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 TRIM16O95361 564 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 CPNE6O95741 557 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 POU2F1P14859 743 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 EDNRBP24530 442 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 LRPAP1P30533 357 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 GJA5P36382 358 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 GRIA4P48058 902 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 ST13P50502 369 aaKnown RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 ETV1P50549 477 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 RAD51Q06609 339 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 ILF2Q12905 390 aaKnown RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 C21orf62-AS1Q17RA5 79 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 ESCO2Q56NI9 601 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 FAM26DQ5JW98 314 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 SYPL2Q5VXT5 272 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 GTF2IRD2BQ6EKJ0 949 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 PM20D1Q6GTS8 502 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 GTF2IRD2Q86UP8 949 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 FAM110BQ8TC76 370 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 CNDP2Q96KP4 475 aaKnown RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 ASB7Q9H672 318 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 IFT80Q9P2H3 777 aaPredicted RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 CACNG4Q9UBN1 327 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
DFFB-202ENST00000339350 GMEB2Q9UKD1 530 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
DFFB-202ENST00000339350 AXIN1O15169 862 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 RETP07949 1114 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 EPHX2P34913 555 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 GRM3Q14832 879 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ABRAXAS1Q6UWZ7 409 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 APBA2Q99767 749 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 DGCR6LQ9BY27 220 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 ADA2Q9NZK5 511 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 F8W810 466 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 M0QYT0 321 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 DNAJB5O75953 348 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 BEST1O76090 585 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 PSKH1P11801 424 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 SPRP35270 261 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 NAB1Q13506 487 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 LAYNQ6UX15 382 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 CYP2R1Q6VVX0 501 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 CLYBLQ8N0X4 340 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 CPNE1Q99829 537 aa12.51□□□□□ -0.41
DFFB-202ENST00000339350 ILKAPQ9H0C8 392 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
DFFB-202ENST00000339350 ENOPH1Q9UHY7 261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms