RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 HLA-DQB2P05538 268 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 CTSEP14091 401 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 NME1P15531 152 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 ZNF30P17039 623 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 GNAZP19086 355 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 DGKAP23743 735 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 GCAP28676 217 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PTPN4P29074 926 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 HNF1BP35680 557 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PFN3P60673 137 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 RPL26P61254 145 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 SEMG2Q02383 582 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 FZD2Q14332 565 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 NFATC4Q14934 902 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 ZRSR2Q15696 482 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 KLHL38Q2WGJ6 581 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 ZNF542PQ5EBM4 170 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 MFSD7Q6UXD7 560 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 LIPIQ6XZB0 460 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 FAM47EQ6ZV65 393 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 ZSWIM9Q86XI8 627 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PHACTR4Q8IZ21 702 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 SLC22A18ASQ8N1D0 253 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 LPCAT1Q8NF37 534 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 LMX1AQ8TE12 382 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 SCG3Q8WXD2 468 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 ADAMTS14Q8WXS8 1223 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 NAF1Q96HR8 494 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 WDR92Q96MX6 357 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 LGMNQ99538 433 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PAIP2Q9BPZ3 127 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 SCNM1Q9BWG6 230 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 MBNL1Q9NR56 388 aaKnown RBP8.39□□□□□ -1.07
PACRG-201ENST00000337019 NLGN3Q9NZ94 848 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 NCKIPSDQ9NZQ3 722 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 MOSPD1Q9UJG1 213 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 ZNF148Q9UQR1 794 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 NEUROG3Q9Y4Z2 214 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 PCDHGA1Q9Y5H4 931 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 CACNA1AO00555 2505 aa8.39□□□□□ -1.07
PACRG-201ENST00000337019 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 A8MUI8 341 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 POC1B-GALNT4F8VUJ3 575 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 CLGNO14967 610 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 PEX11AO75192 247 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 SPAG7O75391 227 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 ZNF189O75820 626 aaPredicted RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 STK10O94804 968 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 ANXA6P08133 673 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 C1SP09871 688 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 ALPIP09923 528 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 ATXN1LP0C7T5 689 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 PECAM1P16284 738 aaPredicted RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 CKMT2P17540 419 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 CTPS1P17812 591 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 SPINK2P20155 84 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 GCKP35557 465 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 CD86P42081 329 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 CDKN2BP42772 138 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 RPIAP49247 311 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 RALGDSQ12967 914 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 DNAJC3Q13217 504 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 INPP5AQ14642 412 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 AGERQ15109 404 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 ELOCQ15369 112 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 SHBQ15464 509 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 CNGA3Q16281 694 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 TSNAXIP1Q2TAA8 658 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 WSCD2Q2TBF2 565 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 PRRT3Q5FWE3 981 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 RNASEH2BQ5TBB1 312 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 RAET1GQ6H3X3 334 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 CAPRIN2Q6IMN6 1127 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 NPNTQ6UXI9 565 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 RD3Q7Z3Z2 195 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 HID1Q8IV36 788 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.38□□□□□ -1.07
PACRG-201ENST00000337019 FSTL5Q8N475 847 aaPredicted RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 CHCHD4Q8N4Q1 142 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 TTC13Q8NBP0 860 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 ZNF548Q8NEK5 533 aaPredicted RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 OR4C6Q8NH72 309 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 UTP4Q969X6 686 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 HAUS1Q96CS2 278 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 PWWP2AQ96N64 755 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 AGAP3Q96P47 875 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 APOOQ9BUR5 198 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 TDRD1Q9BXT4 1180 aaKnown RBP8.38□□□□□ -1.07
PACRG-201ENST00000337019 DCLRE1BQ9H816 532 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 VPS37BQ9H9H4 285 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 USP29Q9HBJ7 922 aa8.38□□□□□ -1.07
PACRG-201ENST00000337019 PHPT1Q9NRX4 125 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms