RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 EID3Q8N140 333 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 SNX31Q8N9S9 440 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 NPLOC4Q8TAT6 608 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 FUBP1Q96AE4 644 aaKnown RBP8.72□□□□□ -1.01
CPNE8-201ENST00000331366 LYSMD1Q96S90 227 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 MAGEH1Q9H213 219 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 TRIT1Q9H3H1 467 aaKnown RBP8.72□□□□□ -1.01
CPNE8-201ENST00000331366 NANOGQ9H9S0 305 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 SLC2A6Q9UGQ3 507 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 SEPT3Q9UH03 358 aa8.72□□□□□ -1.01
CPNE8-201ENST00000331366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 PHGDHO43175 533 aaKnown RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 DYNC1LI2O43237 492 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 SCELO95171 688 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 CYBBP04839 570 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 RB1P06400 928 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 PTPN6P29350 595 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 RPS9P46781 194 aaKnown RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 GSK3BP49841 420 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ABRQ12979 859 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 PEX6Q13608 980 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 RAB39AQ14964 217 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 MS4A13Q5J8X5 152 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ZNF691Q5VV52 312 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ZNF470Q6ECI4 717 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ARHGAP36Q6ZRI8 547 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 LPCAT2Q7L5N7 544 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 GPR65Q8IYL9 337 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 C1orf52Q8N6N3 182 aaKnown RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 TESCQ96BS2 214 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 PSKH2Q96QS6 385 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 PARK7Q99497 189 aaKnown RBP8.71□□□□□ -1.01
CPNE8-201ENST00000331366 RAD9AQ99638 391 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 C1orf50Q9BV19 199 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ELP3Q9H9T3 547 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 CYP4F11Q9HBI6 524 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ERGIC3Q9Y282 383 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 TSC22D4Q9Y3Q8 395 aa8.71□□□□□ -1.01
CPNE8-201ENST00000331366 ARRDC5A6NEK1 342 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ARL5CA6NH57 179 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 PGM3O95394 542 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 GAAP10253 952 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CCR10P46092 362 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 OLIG2Q13516 323 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 DAG1Q14118 895 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 SEMA3AQ14563 771 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 TIGD5Q53EQ6 642 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 MRNIPQ6NTE8 343 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 FAM9CQ8IZT9 166 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CBARPQ8N350 705 aaPredicted RBP8.71□□□□□ -1.02
CPNE8-201ENST00000331366 SLC43A3Q8NBI5 491 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CCNYQ8ND76 341 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 COX4I2Q96KJ9 171 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CNBD2Q96M20 576 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 PHF12Q96QT6 1004 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 TMEM79Q9BSE2 394 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ALG2Q9H553 416 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 DUSP21Q9H596 190 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ANAPC2Q9UJX6 822 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 LOC100653049A0A140TA62 436 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CLDN5O00501 218 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 LSM1O15116 133 aaKnown RBP8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ZMPSTE24O75844 475 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 KRT34O76011 436 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 UPP2O95045 317 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CBSLP0DN79 551 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CBSP35520 551 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 SLC7A2P52569 658 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 NFATC3Q12968 1075 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 SYT6Q5T7P8 510 aaPredicted RBP8.71□□□□□ -1.02
CPNE8-201ENST00000331366 LYPLAL1Q5VWZ2 237 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 DCDC5Q6ZRR9 648 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ZBTB49Q6ZSB9 765 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ATP6V0D2Q8N8Y2 350 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 PROKR1Q8TCW9 393 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ZNF347Q96SE7 839 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CLMPQ9H6B4 373 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 ZFYVE28Q9HCC9 887 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 DNAJB9Q9UBS3 223 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 CLEC11AQ9Y240 323 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 BTRCQ9Y297 605 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 PCDHB1Q9Y5F3 818 aa8.71□□□□□ -1.02
CPNE8-201ENST00000331366 TNPO3Q9Y5L0 923 aaKnown RBP8.71□□□□□ -1.02
CPNE8-201ENST00000331366 TMEM233B4DJY2 109 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 KDELR3O43731 214 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 PRMT3O60678 531 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 UGT2B11O75310 529 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 SERPINB7O75635 380 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 HTR1AP08908 422 aa8.7□□□□□ -1.02
CPNE8-201ENST00000331366 USP17L7P0C7H9 530 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms