RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PKP3Q9Y446 797 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CACNG3O60359 315 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CAPN1P07384 714 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 RHOCP08134 193 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 CDK9P50750 372 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 BNIP3Q12983 259 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 PRKG2Q13237 762 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 TOP1MTQ969P6 601 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 FAM162AQ96A26 154 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 MYEOVQ96EZ4 313 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ACTR3BQ9P1U1 418 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNHIT2Q9UHR6 403 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 NEU3Q9UQ49 428 aa12.79□□□□□ -0.36
HMGCS1-201ENST00000325110 A0A0J9YVX5 310 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 C1orf232A0A0U1RR37 186 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 NDST3O95803 873 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 FDXRP22570 491 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ELK4P28324 431 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 OR4D2P58180 307 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TRPV3Q8NET8 790 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 GAB3Q8WWW8 586 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 SEPT8Q92599 483 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ISOC1Q96CN7 298 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 PLEKHG4BQ96PX9 1271 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 BDH2Q9BUT1 245 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ZFYVE28Q9HCC9 887 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TIMMDC1Q9NPL8 285 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 DUS2Q9NX74 493 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 BRCA2P51587 3418 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 NOBOXO60393 691 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 MMP2P08253 660 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ATXN1LP0C7T5 689 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TACR2P21452 398 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 DNAJB1P25685 340 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 RGRP47804 291 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 IL10RBQ08334 325 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF598Q86UK7 904 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 EPHX4Q8IUS5 362 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TFAP2CQ92754 450 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC30A3Q99726 388 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 AQP12BA6NM10 295 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 J3QRK9 145 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 MTHFD2P13995 350 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 PKMP14618 531 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 HTR6P50406 440 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ATP6V0D1P61421 351 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TRIM32Q13049 653 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 AQP12AQ8IXF9 295 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 FBXL8Q96CD0 374 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TBC1D23Q9NUY8 699 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 TMEM248Q9NWD8 314 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 KLQ9UEF7 1012 aa12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 ZFP37Q9Y6Q3 630 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-201ENST00000325110 A0A1W2PP18 115 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 B4GALT3O60512 393 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 KERAO60938 352 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 KCNH1O95259 989 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 IGLV3-25P01717 112 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 FCGR1AP12314 374 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 GDF5P43026 501 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 NAA20P61599 178 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 PIGFQ07326 219 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 SERINC3Q13530 473 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 AAK1Q2M2I8 961 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 MFSD14CQ5VZR4 134 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 NANOGP8Q6NSW7 305 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 PIANPQ8IYJ0 282 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 ADGRG5Q8IZF4 528 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 GIPC3Q8TF64 312 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 DPF3Q92784 378 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 L3HYPDHQ96EM0 354 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 NANOGQ9H9S0 305 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 GKN1Q9NS71 199 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 IKZF3Q9UKT9 509 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 PHF24Q9UPV7 400 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-201ENST00000325110 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms