RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SRCP12931 536 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ITGB6P18564 788 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 SERPINA4P29622 427 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 CA5AP35218 305 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 MAPK8P45983 427 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 INHBCP55103 352 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ADARP55265 1226 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 PKNOX1P55347 436 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 HTRA4P83105 476 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 CCNIQ14094 377 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 FASTKQ14296 549 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 MMEL1Q495T6 779 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 AGKQ53H12 422 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PITRM1Q5JRX3 1037 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ANKS6Q68DC2 871 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PTRHD1Q6GMV3 140 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 CERS6Q6ZMG9 384 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 LARP4Q71RC2 724 aaKnown RBP eCLIP7.5□□□□□ -1.21
IFT88-201ENST00000319980 SERPINA9Q86WD7 417 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ZSWIM9Q86XI8 627 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 KIRREL3Q8IZU9 778 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 STK40Q8N2I9 435 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 MRPL43Q8N983 215 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 PPFIBP2Q8ND30 876 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 OR9I1Q8NGQ6 314 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 RIN3Q8TB24 985 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TWIST2Q8WVJ9 160 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.5□□□□□ -1.21
IFT88-201ENST00000319980 SERPINI1Q99574 410 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 BOCQ9BWV1 1114 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 MRPL1Q9BYD6 325 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 CIPCQ9C0C6 399 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 AKTIPQ9H8T0 292 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 WDR41Q9HAD4 459 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 CD274Q9NZQ7 290 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ANGPTL2Q9UKU9 493 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ANAPC1Q9H1A4 1944 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 RANBP2P49792 3224 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 NEDD8-MDP1E9PL57 170 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PIP5K1BO14986 540 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 SNX2O60749 519 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 FKBP6O75344 327 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 CRCPO75575 148 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 FGF4P08620 206 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PRDX3P30048 256 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 GCKP35557 465 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ECT2LQ008S8 904 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 LCP2Q13094 533 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 NFATC2Q13469 925 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 HERC3Q15034 1050 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TEAD2Q15562 447 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 BNC2Q6ZN30 1099 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 TSPAN33Q86UF1 283 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 GPSM1Q86YR5 675 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 DCBLD1Q8N8Z6 715 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 HMGCLL1Q8TB92 370 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 N4BP2L2Q92802 583 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 C17orf80Q9BSJ5 609 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 BBS2Q9BXC9 721 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 CLPBQ9H078 707 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 P2RY12Q9H244 342 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 S100A14Q9HCY8 104 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 NDE1Q9NXR1 346 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 GIMAP2Q9UG22 337 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 SLCO3A1Q9UIG8 710 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 BTRCQ9Y297 605 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TIMM22Q9Y584 194 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 GAPDHSO14556 408 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 SOCS5O75159 536 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 LINC00032P0C843 101 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ZNF7P17097 686 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 BPIP17213 487 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TCN1P20061 433 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 CTNNB1P35222 781 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 DPP6P42658 865 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 CLCN7P51798 805 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 HK3P52790 923 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 THOP1P52888 689 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ATXN3P54252 364 aaPredicted RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 NME5P56597 212 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 RPL26P61254 145 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 SNRPD1P62314 119 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 SQLEQ14534 574 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 TGFBIQ15582 683 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 FUT11Q495W5 492 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 UGT3A1Q6NUS8 523 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PCDH20Q8N6Y1 951 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 POF1BQ8WVV4 589 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 MYLIPQ8WY64 445 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 BADQ92934 168 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ASIC4Q96FT7 647 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 ANKRD27Q96NW4 1050 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 LINC00597Q9H2U6 94 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 APPL1Q9UKG1 709 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 PRPF19Q9UMS4 504 aaKnown RBP7.5□□□□□ -1.21
IFT88-201ENST00000319980 COMMD10Q9Y6G5 202 aa7.5□□□□□ -1.21
IFT88-201ENST00000319980 GLYATL1P3A0A0U1RQE8 302 aa7.49□□□□□ -1.21
IFT88-201ENST00000319980 NPIPB15A6NHN6 443 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms