RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MRPL45Q9BRJ2 306 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 C17orf80Q9BSJ5 609 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 HERC2P3Q9BVR0 1158 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MAGIXQ9H6Y5 334 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SIAEQ9HAT2 523 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 COL1A2P08123 1366 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SYNJ2BP-COX16A0A087WUM0 186 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 G3V2T6 193 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MT-CO1P00395 513 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 UROSP10746 265 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MTHFD1P11586 935 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 BMP4P12644 408 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 GGT1P19440 569 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PSMB9P28065 219 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 AMHR2Q16671 573 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PPP1R3AQ16821 1122 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 BRMS1LQ5PSV4 323 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PM20D1Q6GTS8 502 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 LBX2Q6XYB7 198 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 DYNC2LI1Q8TCX1 351 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CAPSLQ8WWF8 208 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RNF34Q969K3 372 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TBC1D20Q96BZ9 403 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 LGALS12Q96DT0 336 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF300Q96RE9 604 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 FDXACB1Q9BRP7 624 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 C1QTNF3Q9BXJ4 246 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MARCH7Q9H992 704 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 NEK6Q9HC98 313 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PIGVQ9NUD9 493 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 COX16Q9P0S2 106 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 USP21Q9UK80 565 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SLC27A5Q9Y2P5 690 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 AP1M2Q9Y6Q5 423 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 WNT10BO00744 389 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 UPK1BO75841 260 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RAD17O75943 681 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 HTR1BP28222 390 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 UGT2B10P36537 528 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ETFBP38117 255 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MLLT10P55197 1068 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CDH13P55290 713 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 WNT3AP56704 352 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CLCQ05315 142 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PRKCDQ05655 676 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ADIGQ0VDE8 80 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TTLL4Q14679 1199 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 IMPG1Q17R60 797 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PGS1Q32NB8 556 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CELF3Q5SZQ8 465 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TMC5Q6UXY8 1006 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RIOX2Q8IUF8 465 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PHYKPLQ8IUZ5 450 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC103Q8IW40 242 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TP53INP1Q96A56 240 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SPATA33Q96N06 139 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF599Q96NL3 588 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 HOXD1Q9GZZ0 328 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MINDY3Q9H8M7 445 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ACTR8Q9H981 624 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RGS18Q9NS28 235 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CRNNQ9UBG3 495 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 INTS6Q9UL03 887 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 FAM92AA1XBS5 289 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ANKRD34BA5PLL1 514 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PLK4O00444 970 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 BCKDKO14874 412 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ONECUT3O60422 494 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 LRIG2O94898 1065 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CYP11A1P05108 521 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ALDOCP09972 364 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ATXN1P54253 815 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 INAVAQ3KP66 663 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 XKRXQ6PP77 449 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RNF135Q8IUD6 432 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 P3H2Q8IVL5 708 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SIMC1Q8NDZ2 872 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 KIAA1191Q96A73 305 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 FAM49AQ9H0Q0 323 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 DDX28Q9NUL7 540 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SMPD4Q9NXE4 827 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CST1P01037 141 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MYCP01106 439 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CHRM3P20309 590 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TIE1P35590 1138 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 MAPK10P53779 464 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 DAOAP59103 153 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CHRNEQ04844 493 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 YWHAHQ04917 246 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CAPRIN1Q14444 709 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TYSND1Q2T9J0 566 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CLEC6AQ6EIG7 209 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 DENND5AQ6IQ26 1287 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PNCKQ6P2M8 343 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM192Q8IY95 271 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ELMOD1Q8N336 334 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 RMDN1Q96DB5 314 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PPP3R2Q96LZ3 170 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms