RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 KLQ9UEF7 1012 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ADGRE2Q9UHX3 823 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 B3GNT3Q9Y2A9 372 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 KCTD3Q9Y597 815 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 TYW5A2RUC4 315 aaKnown RBP11.33□□□□□ -0.6
TRUB1-201ENST00000298746 GLP2RO95838 553 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 HLA-DQB2P05538 268 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 C7P10643 843 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ARNTP27540 789 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 GSTM2P28161 218 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 NCS1P62166 190 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 DAB2P98082 770 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PTPRCAPQ14761 206 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PYCR3Q53H96 274 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PLEKHG7Q6ZR37 379 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 CLEC20AQ6ZU45 233 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PROSER1Q86XN7 944 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 CRYBG2Q8N1P7 616 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ZNF540Q8NDQ6 660 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 UGT2B28Q9BY64 529 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 ATP13A3Q9H7F0 1226 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 SP110Q9HB58 689 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 PARVBQ9HBI1 364 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 RASSF1Q9NS23 344 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRUB1-201ENST00000298746 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 RAP2AP10114 183 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TCF3P15923 654 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 AXLP30530 894 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 S100A5P33763 92 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 GGT5P36269 586 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ARCN1P48444 511 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ILF2Q12905 390 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 PHKG1Q16816 387 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 PAN2Q504Q3 1202 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ANKRD34AQ69YU3 496 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SULT1C3Q6IMI6 304 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 PTERQ96BW5 349 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TEX37Q96LM6 180 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 MAGEL2Q9UJ55 1249 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ERVK-11Q9UQG0 969 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SMIM28A0A1B0GU29 152 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 H3BRB1 525 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 BTN3A1O00481 513 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 APOA1P02647 267 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SLC2A3P11169 496 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SCNN1AP37088 669 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ARHGDIAP52565 204 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SYT16Q17RD7 645 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 INAVAQ3KP66 663 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 UGT3A2Q3SY77 523 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 UGT3A1Q6NUS8 523 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 MILR1Q7Z6M3 343 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ARMC8Q8IUR7 673 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 OR2T12Q8NG77 320 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 OR10A6Q8NH74 314 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 KCNN1Q92952 543 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 LRRC3Q9BY71 257 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TPK1Q9H3S4 243 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 KIF17Q9P2E2 1029 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 MICAL3Q7RTP6 2002 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 FAM20BO75063 409 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 CDH1P12830 882 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 FMO4P31512 558 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 TRAF3Q13114 568 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 PLA2G4EQ3MJ16 856 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 OSTM1Q86WC4 334 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 GATAD2AQ86YP4 633 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 PSD4Q8NDX1 1056 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ZFYVE19Q96K21 471 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 SLC39A8Q9C0K1 460 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 R3HDMLQ9H3Y0 253 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 CATSPERBQ9H7T0 1116 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 ACTR8Q9H981 624 aa11.32□□□□□ -0.6
TRUB1-201ENST00000298746 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
TRUB1-201ENST00000298746 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ENPP3O14638 875 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 CCNKO75909 580 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 CPNE6O95741 557 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ZNF682O95780 498 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ZNF37AP17032 561 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 FSHRP23945 695 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ATP4BP51164 291 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms