RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 AOX1Q06278 1338 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 LOC100509620A0A075B734 347 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 HTR3EA5X5Y0 456 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 AQP7P3A6NL99 342 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ANXA2P2A6NMY6 339 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TBKBP1A7MCY6 615 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 E9PBE3 544 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CASC3O15234 703 aaKnown RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 PAPSS1O43252 624 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 CACNG3O60359 315 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 BCAR3O75815 825 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SLCO2B1O94956 709 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RASAL1O95294 804 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CER1O95813 267 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TGFAP01135 160 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 KLKB1P03952 638 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 GRPP07492 148 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CCDC192P0DO97 292 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 HK1P19367 917 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CCND2P30279 289 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CHRNA3P32297 505 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PNPLA4P41247 253 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PTGER3P43115 390 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MAGEA8P43361 318 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 VPS41P49754 854 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RAB28P51157 221 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CLCNKAP51800 687 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 METAP1P53582 386 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TFAP4Q01664 338 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SPAG1Q07617 926 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 NIPAL4Q0D2K0 466 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SREBF2Q12772 1141 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 IL24Q13007 206 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 IKQ13123 557 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 PLD1Q13393 1074 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MTM1Q13496 603 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 DOC2AQ14183 400 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RRP1BQ14684 758 aaKnown RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 ARHGEF6Q15052 776 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CLPPQ16740 277 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 KCTD21Q4G0X4 260 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MANEALQ5VSG8 457 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 FKBP1CQ5VVH2 108 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ABLIM2Q6H8Q1 611 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 KIAA0930Q6ICG6 404 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 AFTPHQ6ULP2 937 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ABHD15Q6UXT9 468 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PACS1Q6VY07 963 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RNF207Q6ZRF8 634 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MED25Q71SY5 747 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CENPQQ7L2Z9 268 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 TAS2R42Q7RTR8 314 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 DDIASQ8IXT1 998 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PQLC1Q8N2U9 271 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 BBS5Q8N3I7 341 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TC2NQ8N9U0 490 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 FAM184AQ8NB25 1140 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MDGA1Q8NFP4 955 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 OR7D4Q8NG98 312 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 OR13C2Q8NGS9 318 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ZNF671Q8TAW3 534 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MDM1Q8TC05 714 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SGCDQ92629 289 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TFAP2CQ92754 450 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 BCL2L2Q92843 193 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 KLHL29Q96CT2 875 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 HDAC11Q96DB2 347 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 LINC00615Q96LM1 132 aaPredicted RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 SAMD8Q96LT4 415 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 WWC2-AS2Q96NR7 200 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CD180Q99467 661 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PARK7Q99497 189 aaKnown RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 MNTQ99583 582 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 PKP2Q99959 881 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TUBA1CQ9BQE3 449 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 NUDT22Q9BRQ3 303 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 CARD6Q9BX69 1037 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ZNF350Q9GZX5 532 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SLC25A32Q9H2D1 315 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 XKR8Q9H6D3 395 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 NRDE2Q9H7Z3 1164 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 TMEM206Q9H813 350 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 HPS4Q9NQG7 708 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 FAM114A2Q9NRY5 505 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 LANCL2Q9NS86 450 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RNF186Q9NXI6 227 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ALKBH4Q9NXW9 302 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.6□□□□□ -1.67
CD44-202ENST00000278385 UBAP1Q9NZ09 502 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 ANKMY1Q9P2S6 941 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 IPO11Q9UI26 975 aaKnown RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 GABRQQ9UN88 632 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 SLC8A2Q9UPR5 921 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 HPSEQ9Y251 543 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 RUVBL1Q9Y265 456 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms