RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 TNPO2O14787 897 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 MUSKO15146 869 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 ZNF865P0CJ78 1059 aaPredicted RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 RHOQP17081 205 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 DNAJB1P25685 340 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 POLR2JP52435 117 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 PIGFQ07326 219 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 TWF1Q12792 350 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 BNIP2Q12982 314 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 TUSC3Q13454 348 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 LAPTM5Q13571 262 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 UGT3A2Q3SY77 523 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 ZBED5Q49AG3 693 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 MILR1Q7Z6M3 343 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 AQP12AQ8IXF9 295 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 DCP1BQ8IZD4 617 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 ADGRG5Q8IZF4 528 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 OR10Q1Q8NGQ4 319 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 HM13Q8TCT9 377 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 SEPT8Q92599 483 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 EGFL8Q99944 293 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 EXD2Q9NVH0 621 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 ABT1Q9ULW3 272 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 SQORQ9Y6N5 450 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 U3KQV3 271 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 A8MX80 341 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 ZNF182P17025 639 aaPredicted RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 OR4D2P58180 307 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 ATP6V0D1P61421 351 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 TAF10Q12962 218 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 AAK1Q2M2I8 961 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 C18orf21Q32NC0 220 aaPredicted RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 ZNF280BQ86YH2 543 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 PLGRKTQ9HBL7 147 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 SPATA7Q9P0W8 599 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 NEU3Q9UQ49 428 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
LIG1-201ENST00000263274 MKI67P46013 3256 aaKnown RBP12.55□□□□□ -0.4
LIG1-201ENST00000263274 KANSL1LA0AUZ9 987 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 NOBOXO60393 691 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 C1RP00736 705 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 IRF1P10914 325 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 MTHFD2P13995 350 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 RAB39AQ14964 217 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 AARS2Q5JTZ9 985 aaKnown RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 OGFOD2Q6N063 350 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 NANOGP8Q6NSW7 305 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 NANOGNBQ7Z5D8 188 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 GPSM1Q86YR5 675 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 BIRC7Q96CA5 298 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 MTFMTQ96DP5 389 aaKnown RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 NANOGQ9H9S0 305 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 FANCEQ9HB96 536 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 ZFP14Q9HCL3 533 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 WDR37Q9Y2I8 494 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 FXYD1O00168 92 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 HMOX2P30519 316 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 KCNQ1P51787 676 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 AASDHQ4L235 1098 aaPredicted RBP12.54□□□□□ -0.4
LIG1-201ENST00000263274 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 MSANTD2Q6P1R3 559 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 SYVN1Q86TM6 617 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 OR52B6Q8NGF0 335 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 ITFG1Q8TB96 612 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 L3HYPDHQ96EM0 354 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 CENPOQ9BU64 300 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 SPC25Q9HBM1 224 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 ARMC1Q9NVT9 282 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 DGKBQ9Y6T7 804 aa12.54□□□□□ -0.4
LIG1-201ENST00000263274 A0A1W2PP18 115 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 STX7O15400 261 aaKnown RBP12.53□□□□□ -0.4
LIG1-201ENST00000263274 BNIP3LO60238 219 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 VPS26AO75436 327 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
LIG1-201ENST00000263274 MMP2P08253 660 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 SLC2A4P14672 509 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 FDXRP22570 491 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 CAPGP40121 348 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 C21orf59P57076 290 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 CHRNB3Q05901 458 aa12.53□□□□□ -0.4
LIG1-201ENST00000263274 BLOC1S3Q6QNY0 202 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms