RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 GZMAP12544 262 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 CDH5P33151 784 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 NR0B1P51843 470 aaKnown RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 MADCAM1Q13477 382 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SH3PXD2AQ5TCZ1 1133 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF276Q8N554 614 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM161BQ8NDZ6 487 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 GORASP1Q9BQQ3 440 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 PDZD7Q9H5P4 517 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 EXD2Q9NVH0 621 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 CYP4B1P13584 511 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 CENPIQ92674 756 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 C19orf60Q96EN9 201 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 BRD7Q9NPI1 651 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 AP4S1Q9Y587 144 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ANPEPP15144 967 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF143P52747 638 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 PON2Q15165 354 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 NEDD8Q15843 81 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 OLFML2AQ68BL7 652 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SLC29A4Q7RTT9 530 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 LRRC49Q8IUZ0 686 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 DNAAF1Q8NEP3 725 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SLC22A8Q8TCC7 542 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ZHX1-C8orf76Q96EF9 292 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 C2CD2Q9Y426 696 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SLC6A2P23975 617 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 HSPA13P48723 471 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 MCL1Q07820 350 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SMARCB1Q12824 385 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 MAMLD1Q13495 774 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.111e-7■■□□□ 12.1
SHANK3-201ENST00000262795 DHFR2Q86XF0 187 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 TCP10LQ8TDR4 215 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 MED31Q9Y3C7 131 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ATP6AP2A0A1C7CYW4 349 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SLCO1B7G3V0H7 640 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 SYN3O14994 580 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ATP6AP2O75787 350 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 EOMESO95936 686 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 HNRNPLP14866 589 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 21.9
SHANK3-201ENST00000262795 ECT2LQ008S8 904 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 RFX4Q33E94 735 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 ARMC3Q5W041 872 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 MBLAC2Q68D91 279 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 BPIFB1Q8TDL5 484 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 WDR77Q9BQA1 342 aaPredicted RBP15.74■□□□□ 0.11
SHANK3-201ENST00000262795 PREX1Q8TCU6 1659 aa15.74■□□□□ 0.11
SHANK3-201ENST00000262795 TRIM64BA6NI03 449 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 PECAM1P16284 738 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 UGT2B15P54855 530 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ABATP80404 500 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 SRYQ05066 204 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 C1orf186Q6ZWK4 172 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ECHDC2Q86YB7 292 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 TMEM145Q8NBT3 493 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 CLP1Q92989 425 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 CD101Q93033 1021 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 MYOCOSA0A1B0GUC4 107 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 PGM3O95394 542 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 CPN2P22792 545 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 WNT3AP56704 352 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ARF3P61204 181 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ARF1P84077 181 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 POU5F1Q01860 360 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ZBTB6Q15916 424 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ZIK1Q3SY52 487 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 SLC9A4Q6AI14 798 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 NOXRED1Q6NXP6 359 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 CYP2U1Q7Z449 544 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ZBTB46Q86UZ6 589 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 RP9Q8TA86 221 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 BSNDQ8WZ55 320 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 HSFY1Q96LI6 401 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 CCNL2Q96S94 520 aaPredicted RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 VAT1Q99536 393 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 PACSIN3Q9UKS6 424 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ETS2P15036 469 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 FASP25445 335 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 LMO2P25791 158 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 MATKP42679 507 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 DGCR6Q14129 220 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 SAMD4BQ5PRF9 694 aaKnown RBP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 C6orf132Q5T0Z8 1188 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 OR4K17Q8NGC6 315 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ACDQ96AP0 544 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 ZNF607Q96SK3 696 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHANK3-201ENST00000262795 BTN3A3O00478 584 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 RFXANKO14593 260 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 DCXO43602 365 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 B4GALT4O60513 344 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 PDE9AO76083 593 aa15.73■□□□□ 0.11
SHANK3-201ENST00000262795 SERPINA1P01009 418 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms