RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C11orf16Q9NQ32 467 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 A0A1W2PPM1 405 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 BCKDKO14874 412 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 RNASEH2AO75792 299 aaKnown RBP14.2□□□□□ -0.14
CUX2-201ENST00000261726 PPP3R1P63098 170 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 TBC1D25Q3MII6 688 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 ZCCHC12Q6PEW1 402 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 PLET1Q6UQ28 207 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 CHERPQ8IWX8 916 aaKnown RBP14.2□□□□□ -0.14
CUX2-201ENST00000261726 FBXW2Q9UKT8 454 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 RAB21Q9UL25 225 aa14.2□□□□□ -0.14
CUX2-201ENST00000261726 EPHB6O15197 1021 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 PAGE1O75459 146 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 FGF1P05230 155 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 FABP3P05413 133 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 SLC20A2Q08357 652 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 SMARCD3Q6STE5 483 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ADGRG6Q86SQ4 1221 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 LNX2Q8N448 690 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ZCCHC10Q8TBK6 192 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 FCRL2Q96LA5 508 aaPredicted RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 MED31Q9Y3C7 131 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 GRM6O15303 877 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ATG13O75143 517 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 CCNKO75909 580 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 UROSP10746 265 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 POLR2JP52435 117 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 WNT3AP56704 352 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 TSPAN5P62079 268 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 TLR1Q15399 786 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 PYHIN1Q6K0P9 492 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 WRAP53Q9BUR4 548 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 GMEB1Q9Y692 573 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 H3BM21 787 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 CABYRO75952 493 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 APODP05090 189 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 MRPS5P82675 430 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 TXNL4AP83876 142 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 NTRK3Q16288 839 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 FBXO48Q5FWF7 155 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ELAC1Q9H777 363 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 SLCO1B3Q9NPD5 702 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 KCNQ5Q9NR82 932 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 DNAJC11Q9NVH1 559 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 hCG_1818297A0A087WSY0 165 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 TNFRSF11BO00300 401 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 NDUFA9Q16795 377 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 RNASEH2BQ5TBB1 312 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 AMIGO1Q86WK6 493 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ARL10Q8N8L6 244 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 OR14C36Q8NHC7 312 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ACMSDQ8TDX5 336 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 TAPBPLQ9BX59 468 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 MTFR1LQ9H019 292 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 MED28Q9H204 178 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 WDR55Q9H6Y2 383 aaPredicted RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 TRPS1Q9UHF7 1281 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 A0A0U1RQJ8 604 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 IL12BP29460 328 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ARL3P36405 182 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 RPL7AP62424 266 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 GLYATQ6IB77 296 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
CUX2-201ENST00000261726 BLOC1S4Q9NUP1 217 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 ZNF221Q9UK13 617 aa14.19□□□□□ -0.14
CUX2-201ENST00000261726 PRR5-ARHGAP8B1AHC4 643 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 KELP23276 732 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 PTPN9P43378 593 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 BRCC3P46736 316 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 RGS8P57771 180 aaPredicted RBP14.18□□□□□ -0.14
CUX2-201ENST00000261726 ARHGAP8P85298 464 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 HSPB3Q12988 150 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 PRSS58Q8IYP2 241 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 ZBTB2Q8N680 514 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 ART4Q93070 314 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 SLC17A7Q9P2U7 560 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 DMTF1Q9Y222 760 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 TIMM22Q9Y584 194 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 PTPRJQ12913 1337 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 GATBO75879 557 aaKnown RBP14.18□□□□□ -0.14
CUX2-201ENST00000261726 STBD1O95210 358 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 SNX4O95219 450 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 OLR1P78380 273 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 SPATA19Q7Z5L4 167 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 PIK3R3Q92569 461 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 EFHD2Q96C19 240 aaPredicted RBP14.18□□□□□ -0.14
CUX2-201ENST00000261726 CDT1Q9H211 546 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 SP140LQ9H930 580 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
CUX2-201ENST00000261726 PCYOX1Q9UHG3 505 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 LDOC1O95751 146 aaPredicted RBP14.18□□□□□ -0.14
CUX2-201ENST00000261726 NR4A1P22736 598 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 C6orf52Q5T4I8 152 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 CRYBG2Q8N1P7 616 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 CPA6Q8N4T0 437 aa14.18□□□□□ -0.14
CUX2-201ENST00000261726 IDI2Q9BXS1 227 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms