RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 OR4L1Q8NH43 312 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 HM13Q8TCT9 377 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 GPR21Q99679 349 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 TMEM106CQ9BVX2 250 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 OSBPL6Q9BZF3 934 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 MRM3Q9HC36 420 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 POLR3BQ9NW08 1133 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 CHCHD3Q9NX63 227 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 GMIPQ9P107 970 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ACTR3BQ9P1U1 418 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 WARS2Q9UGM6 360 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 ANAPC2Q9UJX6 822 aa14.37□□□□□ -0.11
SFSWAP-201ENST00000261674 J3QRK9 145 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SNX2O60749 519 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 NOL3O60936 208 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CAPNS1P04632 268 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CYBBP04839 570 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SELPP16109 830 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 MAP4P27816 1152 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ELK4P28324 431 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CCR3P51677 355 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CLCN2P51788 898 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ATP1A4Q13733 1029 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 PTPRNQ16849 979 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ZBED5Q49AG3 693 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 FBXL22Q6P050 247 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 C16orf87Q6PH81 154 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 FBXL8Q96CD0 374 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SERPINB11Q96P15 392 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SMOC2Q9H3U7 446 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ARMC1Q9NVT9 282 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 PKD2L2Q9NZM6 624 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CD274Q9NZQ7 290 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC12A8A0AV02 714 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ALBP02768 609 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF182P17025 639 aaPredicted RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 RPS9P46781 194 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 MTPNP58546 118 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ATP6V0D1P61421 351 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 RAB39AQ14964 217 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 FAM171BQ6P995 826 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC2A7Q6PXP3 512 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 ABRAXAS1Q6UWZ7 409 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 TTC9BQ8N6N2 239 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 OR4K2Q8NGD2 314 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CHID1Q9BWS9 393 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 LTB4R2Q9NPC1 389 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 LRFN2Q9ULH4 789 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC27A5Q9Y2P5 690 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 AQP12BA6NM10 295 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 H0YJX3 145 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 BOLA2-SMG1P6H3BVE0 249 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 MUSKO15146 869 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 KCNH1O95259 989 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CHEK2O96017 543 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 MMP2P08253 660 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 CD247P20963 164 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 PIK3CGP48736 1102 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 IST1P53990 364 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 MS4A13Q5J8X5 152 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 LDLRAP1Q5SW96 308 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 TBPL2Q6SJ96 375 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 AQP12AQ8IXF9 295 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 SMPD3Q9NY59 655 aaPredicted RBP14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 IKZF3Q9UKT9 509 aa14.36□□□□□ -0.11
SFSWAP-201ENST00000261674 VCANP13611 3396 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 SCAMP3O14828 347 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 ECI2O75521 394 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 OR4F21O95013 312 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 DGKQP52824 942 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 MANEALQ5VSG8 457 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 GPR180Q86V85 440 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 DCP1BQ8IZD4 617 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TNIP2Q8NFZ5 429 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 STAG3L4Q8TBR4 150 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 L3HYPDHQ96EM0 354 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 PLGRKTQ9HBL7 147 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 BBIP1A8MTZ0 92 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 SLC22A3O75751 556 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 PEX11BO96011 259 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 IGLV3-25P01717 112 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 IDO1P14902 403 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 VARSP26640 1264 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 OR4D2P58180 307 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TUBA4AP68366 448 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 LCP2Q13094 533 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 IMPG1Q17R60 797 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 OGFOD2Q6N063 350 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 SEPT8Q92599 483 aa14.35□□□□□ -0.11
SFSWAP-201ENST00000261674 ZUFSPQ96AP4 578 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms