RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ZXDBP98169 803 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 KIF19Q2TAC6 998 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 EML3Q32P44 896 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 ARMC12Q5T9G4 340 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 BLOC1S3Q6QNY0 202 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 ACDQ96AP0 544 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 LINGO1Q96FE5 620 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 SLC22A12Q96S37 553 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PCDHAC1Q9H158 963 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 PFDN4Q9NQP4 134 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 AP4S1Q9Y587 144 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 INSL5Q9Y5Q6 135 aa16.03■□□□□ 0.16
UBE3D-201ENST00000237186 CARNS1A5YM72 827 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 GOLGA8CPA6NN73 597 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 DNAJA2O60884 412 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 LINC00032P0C843 101 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 CHRM3P20309 590 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 RPS3P23396 243 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 SLC7A1P30825 629 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 PDK3Q15120 406 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 PTPRRQ15256 657 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 C6orf10Q5SRN2 563 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 IL23RQ5VWK5 629 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 UGT2A3Q6UWM9 527 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 SYVN1Q86TM6 617 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 ITIH5Q86UX2 942 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 SNX31Q8N9S9 440 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 HGH1Q9BTY7 390 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 GPR63Q9BZJ6 419 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 Q9H521 79 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 RC3H2Q9HBD1 1191 aaKnown RBP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF334Q9HCZ1 680 aaPredicted RBP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
UBE3D-201ENST00000237186 SLC30A1Q9Y6M5 507 aa16.02■□□□□ 0.16
UBE3D-201ENST00000237186 COL4A6Q14031 1691 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 E5RI56 91 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 HTRA2O43464 458 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 URODP06132 367 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CAPN3P20807 821 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 PRDX3P30048 256 aaKnown RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 MAPK8P45983 427 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 HSPA13P48723 471 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 AGTR2P50052 363 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 SLC7A2P52569 658 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 FOXM1Q08050 763 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 TGFBIQ15582 683 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 MPP7Q5T2T1 576 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 RETSATQ6NUM9 610 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 FBXL19Q6PCT2 694 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 PHC3Q8NDX5 983 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.01■□□□□ 0.155e-7■■■■■ 35.3
UBE3D-201ENST00000237186 ATP6V1E2Q96A05 226 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 ZUFSPQ96AP4 578 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 ZNF382Q96SR6 550 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 NUDT4Q9NZJ9 180 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 ST14Q9Y5Y6 855 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 E2F3O00716 465 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 SNX2O60749 519 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CRCPO75575 148 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CHEK2O96017 543 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CHN2P52757 468 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 TLE2Q04725 743 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CDH18Q13634 790 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 PCBP2Q15366 365 aaKnown RBP eCLIP16.01■□□□□ 0.153e-6■■■□□ 14.6
UBE3D-201ENST00000237186 TLR1Q15399 786 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 SPOUT1Q5T280 376 aaKnown RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 RNF220Q5VTB9 566 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 TAS2R42Q7RTR8 314 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 LYSMD3Q7Z3D4 306 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 METTL3Q86U44 580 aaKnown RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CPXM2Q8N436 756 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CHCHD4Q8N4Q1 142 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 GOLM1Q8NBJ4 401 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 MYO19Q96H55 970 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 BRINP2Q9C0B6 783 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 GID8Q9NWU2 228 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 GIMAP2Q9UG22 337 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 BTRCQ9Y297 605 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 TNPO3Q9Y5L0 923 aaKnown RBP16.01■□□□□ 0.15
UBE3D-201ENST00000237186 CPQQ9Y646 472 aa16.01■□□□□ 0.15
UBE3D-201ENST00000237186 A0A1W2PP18 115 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 GAPDHSO14556 408 aaPredicted RBP16■□□□□ 0.15
UBE3D-201ENST00000237186 ANGPT2O15123 496 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 SOCS5O75159 536 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 TRBC1P01850 177 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 CYBBP04839 570 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms