RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 RIT1Q92963 219 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 ELMO3Q96BJ8 720 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 METTL2AQ96IZ6 378 aaKnown RBP12.8□□□□□ -0.36
VAMP4-201ENST00000236192 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
VAMP4-201ENST00000236192 AZIN1O14977 448 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FGFR2P21802 821 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 GEMP55040 296 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 RAB5BP61020 215 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 PFKPQ01813 784 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CRY1Q16526 586 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FAM117BQ6P1L5 589 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 C9orf43Q8TAL5 461 aaPredicted RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 TIGARQ9NQ88 270 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ACSS2Q9NR19 701 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ERVK13-1Q9NX77 482 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FAM159BA6NKW6 160 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 RFPL1O75677 317 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 APOC1P02654 83 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 PEPDP12955 493 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 XPAP23025 273 aaPredicted RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 MAP2K4P45985 399 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SETMARQ53H47 684 aaPredicted RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CREB3L2Q70SY1 520 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 METTL4Q8N3J2 472 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SAMD4AQ9UPU9 718 aaKnown RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 OR14I1A6ND48 311 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FAM220BPB1ANY3 271 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 NKRFO15226 690 aaKnown RBP eCLIP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 DGAT1O75907 488 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 HES5Q5TA89 166 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 C1orf186Q6ZWK4 172 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 FBXO39Q8N4B4 442 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ATPAF2Q8N5M1 289 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 OR56A4Q8NGH8 313 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SLC35B2Q8TB61 432 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CYP3A43Q9HB55 503 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 CISHQ9NSE2 258 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 GAKO14976 1311 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ASB14A6NK59 587 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 SCELO95171 688 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 METTL18O95568 372 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 HMGN1P05114 100 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
VAMP4-201ENST00000236192 GAD2Q05329 585 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 GCNT7Q6ZNI0 430 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 KRT78Q8N1N4 520 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 TBC1D19Q8N5T2 526 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 ACTR10Q9NZ32 417 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 COMMD9Q9P000 198 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 TEX264Q9Y6I9 313 aa12.79□□□□□ -0.36
VAMP4-201ENST00000236192 METTL21EPA6NDL7 271 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 A8MX80 341 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 MDM4O15151 490 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 LCN1P31025 176 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SREBF1P36956 1147 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 POLR2JP52435 117 aaKnown RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 MXD1Q05195 221 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 LRRC74AQ0VAA2 488 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 SGO1Q5FBB7 561 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 CFAP77Q6ZQR2 320 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 CDHR3Q6ZTQ4 885 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 GLIS1Q8NBF1 620 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 KLHL6Q8WZ60 621 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 TCRBV7S3A2A0A539 114 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 H3BUI4 141 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 TRIM3O75382 744 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 NDUFS3O75489 264 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 ANXA3P12429 323 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 KCNA6P17658 529 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PPP3CCP48454 512 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 KCTD15Q96SI1 283 aaPredicted RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 KIFC1Q9BW19 673 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 RGS13O14921 159 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
VAMP4-201ENST00000236192 TGFBR2P37173 567 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 GRIK5Q16478 980 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
VAMP4-201ENST00000236192 OR52K1Q8NGK4 314 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms