RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NR3C2P08235 984 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 TNNI3P19429 210 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 BTF3P20290 206 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 YIPF7Q8N8F6 280 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 TXNDC5Q8NBS9 432 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 MAGEB10Q96LZ2 347 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 MAGED1Q9Y5V3 778 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 NCAM2O15394 837 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 XPNPEP2O43895 674 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 PTP4A3O75365 173 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 METTL18O95568 372 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 NDUFB10O96000 172 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 ARSAP15289 507 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 CD36P16671 472 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 PTX3P26022 381 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 HTR7P34969 479 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 OLR1P78380 273 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 POU5F1BQ06416 359 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 UGP2Q16851 508 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 GLYATQ6IB77 296 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 AMER2Q8N7J2 671 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 ZNF555Q8NEP9 628 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 OR52H1Q8NGJ2 320 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 KLHL6Q8WZ60 621 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 SCYL1Q96KG9 808 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 DHX35Q9H5Z1 703 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 TRAPPC4Q9Y296 219 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 PEX16Q9Y5Y5 336 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 CIB4A0PJX0 185 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 E5RI56 91 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 STARD3NLO95772 234 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 OLFM2O95897 454 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 APOA4P06727 396 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 GABPAQ06546 454 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 EPS8Q12929 822 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 TYW3Q6IPR3 259 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 FUNDC1Q8IVP5 155 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 RIMKLAQ8IXN7 391 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 ZNF557Q8N988 423 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 TMBIM1Q969X1 311 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 CIDECQ96AQ7 238 aaPredicted RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 INTS12Q96CB8 462 aaKnown RBP12.93□□□□□ -0.34
MSH2-201ENST00000233146 CPNE1Q99829 537 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 MUC13Q9H3R2 512 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 ARHGAP28Q9P2N2 729 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 KLHL21Q9UJP4 597 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 TMCC3Q9ULS5 477 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
MSH2-201ENST00000233146 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 NFIBO00712 420 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 DFNA5O60443 496 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 KELP23276 732 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 BLVRAP53004 296 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 GPAT4Q86UL3 456 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 PTRH1Q86Y79 214 aaKnown RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 PM20D2Q8IYS1 436 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CCNYL1Q8N7R7 359 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 DNAJA4Q8WW22 397 aaPredicted RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 ZNF606Q8WXB4 792 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 NECTIN4Q96NY8 510 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 DUSP21Q9H596 190 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 SLC35C2Q9NQQ7 365 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 GTF2IRD1Q9UHL9 959 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 A0A1W2PRG6 482 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 BCLAF3A2AJT9 711 aaKnown RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 CHMP2AO43633 222 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 ENDOD1O94919 500 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CLK1P49759 484 aaKnown RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 YBX1P67809 324 aaKnown RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 IRF3Q14653 427 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 SPANXN2Q5MJ10 180 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 PADI6Q6TGC4 694 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 ZNF704Q6ZNC4 412 aaPredicted RBP12.92□□□□□ -0.34
MSH2-201ENST00000233146 PHC2Q8IXK0 858 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 RBBP8Q99708 897 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 IL1RL2Q9HB29 575 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 DCAF16Q9NXF7 216 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 CACNG2Q9Y698 323 aa12.92□□□□□ -0.34
MSH2-201ENST00000233146 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms