RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-231ENST00000641939 RNF215Q9Y6U7 377 aa14.89□□□□□ -0.03
PHGDH-231ENST00000641939 FAM208BQ5VWN6 2430 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 GRID2O43424 1007 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 NUAK1O60285 661 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 USP12O75317 370 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ECEL1O95672 775 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 RPLP0P05388 317 aaKnown RBP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 MAZP56270 477 aaKnown RBP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 CCL7P80098 99 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 RPS6KA1Q15418 735 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 RANBP10Q6VN20 620 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ARHGEF18Q6ZSZ5 1173 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 CHST15Q7LFX5 561 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 CCNJLQ8IV13 435 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 Q8N9G6 341 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 FAM71DQ8N9W8 422 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 GFM1Q96RP9 751 aaKnown RBP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 APOL2Q9BQE5 337 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 TMEM121Q9BTD3 319 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 OR2AG1Q9H205 316 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 LRRN3Q9H3W5 708 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ARFGAP3Q9NP61 516 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 IL26Q9NPH9 171 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.88□□□□□ -0.03
PHGDH-231ENST00000641939 IL17CQ9P0M4 197 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ATXN10Q9UBB4 475 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ENTPD2Q9Y5L3 495 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 ZFYVE26Q68DK2 2539 aa14.88□□□□□ -0.03
PHGDH-231ENST00000641939 RHPN2P1A8MT19 583 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 GPR89AB7ZAQ6 455 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 PPFIA2O75334 1257 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 KRT37O76014 449 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 GPR89BP0CG08 455 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ZNF8P17098 575 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-231ENST00000641939 SPAM1P38567 509 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 PDX1P52945 283 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 BIRC2Q13490 618 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 OLIG2Q13516 323 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ATP13A5Q4VNC0 1218 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ZNF648Q5T619 568 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-231ENST00000641939 SPRED1Q7Z699 444 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ADGRG6Q86SQ4 1221 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 SLC13A5Q86YT5 568 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-231ENST00000641939 NAGSQ8N159 534 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ARL14Q8N4G2 192 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 DTX3LQ8TDB6 740 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 PATE1Q8WXA2 126 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 ATXN7L3BQ96GX2 97 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 VPS35Q96QK1 796 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 FRMD8P1Q9BZ68 369 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-231ENST00000641939 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 GRPEL1Q9HAV7 217 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 RAXQ9Y2V3 346 aa14.87□□□□□ -0.03
PHGDH-231ENST00000641939 A0A1W2PQM1 296 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 C2orf81A6NN90 581 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 D6RAR5 112 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 CHUKO15111 745 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 STX7O15400 261 aaKnown RBP14.86□□□□□ -0.03
PHGDH-231ENST00000641939 BUD23O43709 281 aaKnown RBP14.86□□□□□ -0.03
PHGDH-231ENST00000641939 VEGFDO43915 354 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 BRINP1O60477 761 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 MPOP05164 745 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 ACP5P13686 325 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 LPOP22079 712 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-231ENST00000641939 LSSP48449 732 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 GDF10P55107 478 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 NR1D2Q14995 579 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 TAF1AQ15573 450 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-231ENST00000641939 PARP6Q2NL67 630 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 P3H1Q32P28 736 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 FAM151BQ6UXP7 276 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 ZNF438Q7Z4V0 828 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 KLHDC8BQ8IXV7 354 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 BRSK1Q8TDC3 778 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 ATG4AQ8WYN0 398 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 TBL1YQ9BQ87 522 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 ARNT2Q9HBZ2 717 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 TMPRSS11EQ9UL52 423 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 KCNK6Q9Y257 313 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 PPP2R2CQ9Y2T4 447 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 ARL5AQ9Y689 179 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 BPTFQ12830 3046 aa14.86□□□□□ -0.03
PHGDH-231ENST00000641939 GLYATL1P3A0A0U1RQE8 302 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 TMX2-CTNND1H3BSU7 103 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 ZW10O43264 779 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 LIASO43766 372 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 MTX2O75431 263 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 CDK14O94921 469 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 METTL18O95568 372 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 STIP1P31948 543 aaKnown RBP14.85□□□□□ -0.03
PHGDH-231ENST00000641939 GABREP78334 506 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 B4GALNT1Q00973 533 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 PDE1BQ01064 536 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 ITGA9Q13797 1035 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms