RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SEMA4BQ9NPR2 832 aaPredicted RBP19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 CDC14AQ9UNH5 594 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 CLEC11AQ9Y240 323 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 A0A1B0GTL3 188 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 ASPDHA6ND91 283 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 ITGB1P05556 798 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 DCKP27707 260 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 SERINC3Q13530 473 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 CCL14Q16627 93 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 CYBRD1Q53TN4 286 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 ELMSAN1Q6PJG2 1045 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 LYSMD3Q7Z3D4 306 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 IFNEQ86WN2 208 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 VPS33AQ96AX1 596 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 BTN2A3PQ96KV6 586 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 C1QTNF3Q9BXJ4 246 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 FBXO44Q9H4M3 255 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 TAS2R13Q9NYV9 303 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 ZNF639Q9UID6 485 aa19.99■□□□□ 0.79
SYNGAP1-227ENST00000638142 TDRD15B5MCY1 1934 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 RHOBTB1O94844 696 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 CHEK2O96017 543 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 LDLRP01130 860 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 VARSP26640 1264 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 ZFP36L2P47974 494 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 APLP1P51693 650 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 RAD51Q06609 339 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 SLC39A12Q504Y0 691 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 XKR7Q5GH72 579 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 FBXL22Q6P050 247 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 TMEM199Q8N511 208 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 OSCP1Q8WVF1 389 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 SNRNP27Q8WVK2 155 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 IGSF8Q969P0 613 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 PTPN18Q99952 460 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 TRIM8Q9BZR9 551 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 PFDN4Q9NQP4 134 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 ANKRD36A6QL64 1941 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 CCDC154A6NI56 674 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 STX16O14662 325 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 SLC22A3O75751 556 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 BAIAP3O94812 1187 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 RAB15P59190 212 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 CACNB2Q08289 660 aaPredicted RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 MGAT3Q09327 533 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 C16orf72Q14CZ0 275 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 PDCD4Q53EL6 469 aaKnown RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 PAQR3Q6TCH7 311 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 USP51Q70EK9 711 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 LEMD2Q8NC56 503 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 TEX37Q96LM6 180 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 TMEM45AQ9NWC5 275 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 ABI2Q9NYB9 513 aaPredicted RBP19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 PCDHB8Q9UN66 801 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 TTC3P53804 2025 aa19.98■□□□□ 0.79
SYNGAP1-227ENST00000638142 A0A0U1RQF3 1178 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 MGEA5O60502 916 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 ECI2O75521 394 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 CLIC3O95833 236 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 NPPAP01160 153 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 OR4Q2P0C623 313 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 UROSP10746 265 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 HTR1EP28566 365 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PMS2P3Q13401 168 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 GALNT3Q14435 633 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 ZNF235Q14590 738 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 FXNQ16595 210 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PAGE3Q5JUK9 113 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 C9orf131Q5VYM1 1079 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 GDF6Q6KF10 455 aaPredicted RBP19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PROSER1Q86XN7 944 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PNPT1Q8TCS8 783 aaKnown RBP19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 CDKN2AIPNLQ96HQ2 116 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PKD2L2Q9NZM6 624 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 SH3GLB1Q9Y371 365 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 TIMM22Q9Y584 194 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 DOCK3Q8IZD9 2030 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 UBA6A0AVT1 1052 aaPredicted RBP19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 DRGXA6NNA5 263 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 GIPC1O14908 333 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 KPNA6O60684 536 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 ESRRBO95718 433 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 MLYCDO95822 493 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 YBEYP58557 167 aaPredicted RBP19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 ECT2LQ008S8 904 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 RAB39AQ14964 217 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 RAP1GAP2Q684P5 730 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 TXNDC11Q6PKC3 985 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 KIAA2013Q8IYS2 634 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 OFCC1Q8IZS5 231 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 TRPM7Q96QT4 1865 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 DCUN1D5Q9BTE7 237 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 CCDC68Q9H2F9 335 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 RPF2Q9H7B2 306 aaKnown RBP19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 ZIM2Q9NZV7 527 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 SUN2Q9UH99 717 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 PADI3Q9ULW8 664 aa19.97■□□□□ 0.79
SYNGAP1-227ENST00000638142 H3BMQ9 156 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SNX2O60749 519 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 PRAMEF11O60813 436 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms