RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PATE1Q8WXA2 126 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 NUS1Q96E22 293 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 NSMCE3Q96MG7 304 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 QKIQ96PU8 341 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 PHPT1Q9NRX4 125 aaPredicted RBP15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 TAAR2Q9P1P5 351 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 B4GALT6Q9UBX8 382 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 PCDHGC4Q9Y5F7 938 aa15.48■□□□□ 0.07
SNRNP48-203ENST00000634363 IGHV5-10-1A0A0J9YXX1 117 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 H7C0C1 242 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 SUV39H1O43463 412 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 CEACAM5P06731 702 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 MPSTP25325 297 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 NFKBIAP25963 317 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 CD82P27701 267 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 ATP5OP48047 213 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 POLD2P49005 469 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 OTUD4Q01804 1114 aaKnown RBP15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 DSC2Q02487 901 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 XRCC4Q13426 336 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 CLCA4Q14CN2 919 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 NOMO1Q15155 1222 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 SDK2Q58EX2 2172 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 MEI1Q5TIA1 1274 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 NKAIN2Q5VXU1 208 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 NRROSQ86YC3 692 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 IL22RA1Q8N6P7 574 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 TTC13Q8NBP0 860 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 ACTL9Q8TC94 416 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 HTR3CQ8WXA8 447 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 CCDC74BQ96LY2 380 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 COQ10AQ96MF6 247 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 AGAP3Q96P47 875 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 HERPUD2Q9BSE4 406 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 CEP41Q9BYV8 373 aa15.47■□□□□ 0.07
SNRNP48-203ENST00000634363 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 TERTO14746 1132 aaKnown RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 HTRA2O43464 458 aaPredicted RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 PPFIA2O75334 1257 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 CPP00450 1065 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 FGF3P11487 239 aaPredicted RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 CD1CP29017 333 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 ETV3P41162 512 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 ATP1A2P50993 1020 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 EIF3EP60228 445 aaKnown RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 TRAF2Q12933 501 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 PTPRRQ15256 657 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 CNGA3Q16281 694 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 ARMC12Q5T9G4 340 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 DOK6Q6PKX4 331 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 PTRH1Q86Y79 214 aaKnown RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 CDKL3Q8IVW4 592 aaPredicted RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 TAAR9Q96RI9 348 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 ZMYND15Q9H091 742 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 CARD9Q9H257 536 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 KLHL8Q9P2G9 620 aaPredicted RBP15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 SUFUQ9UMX1 484 aa15.46■□□□□ 0.07
SNRNP48-203ENST00000634363 TRBV23OR9-2A0A075B6M9 112 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 PPM1DO15297 605 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 ZNF189O75820 626 aaPredicted RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 STK10O94804 968 aaKnown RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 PTPN3P26045 913 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 VIPR1P32241 457 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 CSTF2P33240 577 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 CTBSQ01459 385 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 TEX44Q53QW1 395 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 RAET1GQ6H3X3 334 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 HSD11B1LQ7Z5J1 315 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 NDUFAF2Q8N183 169 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 CNTD1Q8N815 330 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 PTCD2Q8WV60 388 aaKnown RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 ART4Q93070 314 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 NKD1Q969G9 470 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 PMEPA1Q969W9 287 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 VAT1Q99536 393 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 TEX101Q9BY14 249 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 SLC25A18Q9H1K4 315 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 TRNAU1APQ9NX07 287 aaKnown RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 TRMT1Q9NXH9 659 aaKnown RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 PLEKHM1Q9Y4G2 1056 aa15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 ZFC3H1O60293 1989 aaKnown RBP15.45■□□□□ 0.06
SNRNP48-203ENST00000634363 HGSO14964 777 aaPredicted RBP15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 KIF5CO60282 957 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 HEXIM1O94992 359 aaKnown RBP15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 PGLSO95336 258 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 RBP3P10745 1247 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 CYP2A6P11509 494 aaPredicted RBP15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 ADCY8P40145 1251 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 CD86P42081 329 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 LIMK2P53671 638 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 EPHB1P54762 984 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 CDK3Q00526 305 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 NIPAL4Q0D2K0 466 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 KLF1Q13351 362 aaPredicted RBP15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 DARS2Q6PI48 645 aaKnown RBP15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 Q6ZVL8 140 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 USP45Q70EL2 814 aa15.44■□□□□ 0.06
SNRNP48-203ENST00000634363 C17orf82Q86X59 251 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms