RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ZNF778Q96MU6 729 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 MCMBPQ9BTE3 642 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 SLC6A17Q9H1V8 727 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 SNX2O60749 519 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 GJB3O75712 270 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PYGLP06737 847 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 C5AR1P21730 350 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCND1P24385 295 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 DBN1Q16643 649 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PRR23CQ6ZRP0 262 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 TRIM48Q8IWZ4 208 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 C7orf26Q96N11 449 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF570Q96NI8 536 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CADM1Q9BY67 442 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PHPT1Q9NRX4 125 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 FKBPLQ9UIM3 349 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 WNT9AO14904 365 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 AXIN1O15169 862 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 APBB3O95704 486 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 GLULP15104 373 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRHR1P34998 444 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 GRIA4P48058 902 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CNTN1Q12860 1018 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 KCNC3Q14003 757 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 TBCCQ15814 346 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 INSCQ1MX18 579 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PRSS16Q9NQE7 514 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 HEY2Q9UBP5 337 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 C15orf41Q9Y2V0 281 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PSAT1Q9Y617 370 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 VCLP18206 1134 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 SERPINB3P29508 390 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ARRB2P32121 409 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 SPAM1P38567 509 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 PRKAA2P54646 552 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ITGA9Q13797 1035 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 PKN3Q6P5Z2 889 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 NCEH1Q6PIU2 408 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 Q6ZVL8 140 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ENDOVQ8N8Q3 282 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR2A12Q8NGT7 310 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 SIKE1Q9BRV8 207 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 POLR3BQ9NW08 1133 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 NEU3Q9UQ49 428 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ITM2BQ9Y287 266 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 GPC4O75487 556 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 KLHL2O95198 593 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 FCARP24071 287 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 AKT2P31751 481 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 BST1Q10588 318 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 TUBB3Q13509 450 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 RCN2Q14257 317 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCDC153Q494R4 210 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 RAB3IL1Q8TBN0 382 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 EGFL8Q99944 293 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 TRMT6Q9UJA5 497 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 A0A1W2PQU0 124 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 FPGTO14772 594 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 TCF3P15923 654 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 FMO4P31512 558 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 VIPR1P32241 457 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 CSRP3P50461 194 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 AFTPHQ6ULP2 937 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRTC3Q6UUV7 619 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR6Y1Q8NGX8 325 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 OR4L1Q8NH43 312 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 CERS2Q96G23 380 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 COPS8Q99627 209 aa12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 TDRD1Q9BXT4 1180 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-207ENST00000628646 PTPN4P29074 926 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCR3P51677 355 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 CTBP1Q13363 440 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 ISG20Q96AZ6 181 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 CLGNO14967 610 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 MUSKO15146 869 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 BIRC5O15392 142 aa12.37□□□□□ -0.43
SYNGAP1-207ENST00000628646 VPS26AO75436 327 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms